add r-dapar

1 files changed, 78 insertions, 0 deletions

diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..f98e74030843
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,78 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=DAPAR
+_pkgver=1.28.1
+pkgname=r-${_pkgname,,}
+pkgver=1.28.1
+pkgrel=3
+pkgdesc='Tools for the Differential Analysis of Proteins Abundance with R'
+arch=('any')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('Artistic2.0')
+depends=(
+  r
+  r-annotationdbi
+  r-apcluster
+  r-biobase
+  r-cairo
+  r-clusterprofiler
+  r-cp4p
+  r-dapardata
+  r-dendextend
+  r-diptest
+  r-doparallel
+  r-dplyr
+  r-factoextra
+  r-factominer
+  r-forcats
+  r-foreach
+  r-ggplot2
+  r-gplots
+  r-graph
+  r-highcharter
+  r-igraph
+  r-imp4p
+  r-impute
+  r-knitr
+  r-limma
+  r-lme4
+  r-mfuzz
+  r-msnbase
+  r-multcomp
+  r-norm
+  r-openxlsx
+  r-pcamethods
+  r-png
+  r-preprocesscore
+  r-purrr
+  r-rcolorbrewer
+  r-readxl
+  r-reshape2
+  r-scales
+  r-siggenes
+  r-stringr
+  r-tibble
+  r-tidyr
+  r-tidyverse
+  r-tmvtnorm
+  r-vioplot
+  r-visnetwork
+  r-vsn
+)
+optdepends=(
+  r-biocgenerics
+  r-biocstyle
+  r-testthat
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('ae8c27c13843ce973d37cf34bf1782e35351d768822ccc432835f378e34f10e2')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et: