add r-diffutr

1 files changed, 49 insertions, 0 deletions

diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..f9de491e49e5
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,49 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=diffUTR
+_pkgver=1.4.0
+pkgname=r-${_pkgname,,}
+pkgver=1.4.0
+pkgrel=1
+pkgdesc="diffUTR: Streamlining differential exon and 3' UTR usage"
+arch=('any')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('GPL')
+depends=(
+  r
+  r-complexheatmap
+  r-dexseq
+  r-dplyr
+  r-edger
+  r-ensembldb
+  r-genomeinfodb
+  r-genomicranges
+  r-ggplot2
+  r-ggrepel
+  r-iranges
+  r-limma
+  r-matrixstats
+  r-rsubread
+  r-rtracklayer
+  r-s4vectors
+  r-stringi
+  r-summarizedexperiment
+  r-viridislite
+)
+optdepends=(
+  r-biocstyle
+  r-knitr
+  r-rmarkdown
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('c50e0a87c209ee469d247306c9071ae0920860b062a5768c07fcd534debc0b05')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et: