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| author | Sukanka | 2022-06-06 08:40:40 +0800 |
|---|---|---|
| committer | Sukanka | 2022-06-06 08:40:40 +0800 |
| commit | 87cddbbcc0d3770f5e5e181f67ba06b5fe450193 (patch) | |
| tree | 68b9f6ce8f4acd5378b808b6d3302ce198d62352 /PKGBUILD | |
| download | aur-87cddbbcc0d3770f5e5e181f67ba06b5fe450193.tar.gz | |
add r-dyebias
Diffstat (limited to 'PKGBUILD')
| -rw-r--r-- | PKGBUILD | 35 |
1 files changed, 35 insertions, 0 deletions
diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..5cf627446e0f --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,35 @@ +# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> + +_pkgname=dyebias +_pkgver=1.56.0 +pkgname=r-${_pkgname,,} +pkgver=1.56.0 +pkgrel=1 +pkgdesc='The GASSCO method for correcting for slide-dependent gene-specific dye bias' +arch=('any') +url="https://bioconductor.org/packages/${_pkgname}" +license=('GPL') +depends=( + r + r-biobase + r-marray +) +optdepends=( + r-convert + r-dyebiasexamples + r-geoquery + r-limma + r-methods +) +source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +sha256sums=('60781bf56e004dd2fe94edff8b6af13c2d98678eb100fc930fa36e32dfc39175') + +build() { + R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" +} + +package() { + install -dm0755 "${pkgdir}/usr/lib/R/library" + cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" +} +# vim:set ts=2 sw=2 et: |