add r-epidecoder

1 files changed, 38 insertions, 0 deletions

diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..261011573488
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,38 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=epidecodeR
+_pkgver=1.4.0
+pkgname=r-${_pkgname,,}
+pkgver=1.4.0
+pkgrel=1
+pkgdesc='epidecodeR: a functional exploration tool for epigenetic and epitranscriptomic regulation'
+arch=('any')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('GPL')
+depends=(
+  r
+  r-dplyr
+  r-envstats
+  r-genomicranges
+  r-ggplot2
+  r-ggpubr
+  r-iranges
+  r-rstatix
+  r-rtracklayer
+)
+optdepends=(
+  r-knitr
+  r-rmarkdown
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('aee07a0e2bbf0dbe0daa167133cf43ac13ae534a46ed3721ddcfaf0cac7b36ba')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et: