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author | Sukanka | 2022-06-06 09:11:05 +0800 |
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committer | Sukanka | 2022-06-06 09:11:05 +0800 |
commit | d1a1a024cf70764b3f30328d667e1d4a7c3e510b (patch) | |
tree | 5d4192adec70bafb38220011fbc6ce4b8075022f /PKGBUILD | |
download | aur-d1a1a024cf70764b3f30328d667e1d4a7c3e510b.tar.gz |
add r-epivizr
Diffstat (limited to 'PKGBUILD')
-rw-r--r-- | PKGBUILD | 46 |
1 files changed, 46 insertions, 0 deletions
diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..fac2ab1d3de7 --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,46 @@ +# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> + +_pkgname=epivizr +_pkgver=2.26.0 +pkgname=r-${_pkgname,,} +pkgver=2.26.0 +pkgrel=1 +pkgdesc='R Interface to epiviz web app' +arch=('any') +url="https://bioconductor.org/packages/${_pkgname}" +license=('Artistic2.0') +depends=( + r + r-bumphunter + r-epivizrdata + r-epivizrserver + r-genomeinfodb + r-genomicranges + r-iranges + r-s4vectors +) +optdepends=( + r-antiprofilesdata + r-biobase + r-biocstyle + r-hgu133plus2.db + r-knitr + r-minfi + r-mus.musculus + r-rmarkdown + r-roxygen2 + r-summarizedexperiment + r-testthat +) +source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +sha256sums=('1fde153a1643ad94586f37ac12c11fd6cfff9dd5ff07939d78df712c0ce8f0c3') + +build() { + R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" +} + +package() { + install -dm0755 "${pkgdir}/usr/lib/R/library" + cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" +} +# vim:set ts=2 sw=2 et: |