add r-genenetworkbuilder

1 files changed, 45 insertions, 0 deletions

diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..c138ead560b2
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,45 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=GeneNetworkBuilder
+_pkgver=1.38.0
+pkgname=r-${_pkgname,,}
+pkgver=1.38.0
+pkgrel=1
+pkgdesc='GeneNetworkBuilder: a bioconductor package for building regulatory network using ChIP-chip/ChIP-seq data and Gene Expression Data'
+arch=('x86_64')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('GPL')
+depends=(
+  r
+  r-graph
+  r-htmlwidgets
+  r-plyr
+  r-rcpp
+  r-rgraphviz
+  r-rjson
+  r-xml
+)
+optdepends=(
+  r-biocgenerics
+  r-biocstyle
+  r-knitr
+  r-magick
+  r-rbgl
+  r-rmarkdown
+  r-runit
+  r-shiny
+  r-simpintlists
+  r-stringdb
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('28111ab8cab567bb408dc230c16b5e2c9bff8fc20b5c11a2a4e1d43970bae07b')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et: