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author | Christoph Fink | 2024-04-08 16:54:43 +0200 |
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committer | Christoph Fink | 2024-04-08 16:54:43 +0200 |
commit | 9b441ff0b4eea0c1eaec496c7c05583faf777b49 (patch) | |
tree | 4e2f981138b31474bbaebd0595733ffa46f030bf /PKGBUILD | |
parent | ce66d0f436e4ff44a6b9cf25f3be0b23a3d22541 (diff) | |
download | aur-9b441ff0b4eea0c1eaec496c7c05583faf777b49.tar.gz |
upgpkg: r-genomeinfodb 1.38.8-1
upstream release
Diffstat (limited to 'PKGBUILD')
-rw-r--r-- | PKGBUILD | 8 |
1 files changed, 5 insertions, 3 deletions
@@ -3,14 +3,14 @@ # Contributor: Grey Christoforo <first name at last name dot net> _bcname=GenomeInfoDb -_bcver=1.38.7 +_bcver=1.38.8 pkgname="r-${_bcname,,}" pkgver="${_bcver//[:-]/.}" pkgrel=1 pkgdesc="Utilities for manipulating chromosome names, including modifying them to follow a particular naming style" arch=("any") url="https://bioconductor.org/packages/release/bioc/html/${_bcname}.html" -license=("Artistic2.0") +license=("Artistic-2.0") depends=( "r>=4.0.0" @@ -26,6 +26,7 @@ optdepends=( "r-bsgenome.celegans.ucsc.ce2" "r-bsgenome.hsapiens.ncbi.grch38" "r-bsgenome.scerevisiae.ucsc.saccer2" + "r-data.table" "r-genomicalignments" "r-genomicfeatures" "r-genomicranges" @@ -33,6 +34,7 @@ optdepends=( "r-rsamtools" "r-runit" "r-txdb.dmelanogaster.ucsc.dm3.ensgene" + "r-r.utils" ) # The unittests for `r-pkgcache` have circular @@ -55,7 +57,7 @@ optdepends=( # ) source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_bcname}_${_bcver}.tar.gz") -b2sums=('2b015fdde7dacc64987a771ee031410b635cf917bd820abdc3a0d1d08b9fd4a8a6fc800b8e932478dd30e7f3247d910dbacebe741e427a3c38378b10a217edb1') +b2sums=("25fc978b257f74375504a1639fe2a1c15dcbf089134472fe33e1add1399c4f0b80e497ba898816db6fe2846f81186bbeb1e0ea62f8baa9b806f27db1de70d7c6") build() { mkdir -p "${srcdir}/build/" |