add r-genomictools

1 files changed, 38 insertions, 0 deletions

diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..61188d521d03
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,38 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=GenomicTools
+_pkgver=0.2.9.7
+pkgname=r-${_pkgname,,}
+pkgver=0.2.9.7
+pkgrel=4
+pkgdesc='Collection of Tools for Genomic Data Analysis'
+arch=('x86_64')
+url="https://cran.r-project.org/package=${_pkgname}"
+license=('GPL')
+depends=(
+  r
+  r-circlize
+  r-data.table
+  r-genomictools.filehandler
+  r-gmwt
+  r-rcpp
+  r-rcpparmadillo
+  r-snpstats
+  r-stringr
+)
+optdepends=(
+  r-knitr
+  r-rmarkdown
+)
+source=("https://cran.r-project.org/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('15fcf653177f3b9cb822c4da08d7cc5507b9f48d4a6ca58e523c3e965787daa4')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et: