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| author | Sukanka | 2022-06-06 11:18:02 +0800 |
|---|---|---|
| committer | Sukanka | 2022-06-06 11:18:02 +0800 |
| commit | bc858b8de3e547290711ac46b5f58d95ff72f670 (patch) | |
| tree | 729052a427c8486ae8081a864dd64d1837b5eb8b /PKGBUILD | |
| download | aur-bc858b8de3e547290711ac46b5f58d95ff72f670.tar.gz | |
add r-glimma
Diffstat (limited to 'PKGBUILD')
| -rw-r--r-- | PKGBUILD | 46 |
1 files changed, 46 insertions, 0 deletions
diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..3152a9c99ec0 --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,46 @@ +# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> + +_pkgname=Glimma +_pkgver=2.6.0 +pkgname=r-${_pkgname,,} +pkgver=2.6.0 +pkgrel=1 +pkgdesc='Interactive HTML graphics' +arch=('any') +url="https://bioconductor.org/packages/${_pkgname}" +license=('GPL') +depends=( + r + r-deseq2 + r-edger + r-htmlwidgets + r-jsonlite + r-limma + r-s4vectors + r-summarizedexperiment +) +optdepends=( + r-annotationhub + r-biocstyle + r-genomicranges + r-iranges + r-knitr + r-pryr + r-rmarkdown + r-scater + r-scran + r-scrnaseq + r-testthat +) +source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +sha256sums=('df6f7fd11e6c0913a8527d367624dd2ad21feedd2feff0a68262c19d805727cc') + +build() { + R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" +} + +package() { + install -dm0755 "${pkgdir}/usr/lib/R/library" + cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" +} +# vim:set ts=2 sw=2 et: |