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| author | BioArchLinuxBot | 2023-09-17 12:06:54 +0000 |
|---|---|---|
| committer | BioArchLinuxBot | 2023-09-17 12:06:54 +0000 |
| commit | 3e7725477ef3bb6179ebf9c2772bacfda49ed132 (patch) | |
| tree | c0a7086dc5e77bedabccf84fda76cda5e974e273 /PKGBUILD | |
| parent | 181f7e5bcd03dd8c39fe34b1b5b885a69cd71ac6 (diff) | |
| download | aur-3e7725477ef3bb6179ebf9c2772bacfda49ed132.tar.gz | |
[lilac] updated to 1.1.7-3
Diffstat (limited to 'PKGBUILD')
| -rw-r--r-- | PKGBUILD | 46 |
1 files changed, 28 insertions, 18 deletions
@@ -1,26 +1,33 @@ -# system requirements: GNU make -# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> +# Maintainer: Pekka Ristola <pekkarr [at] protonmail [dot] com> +# Contributor: Guoyi Zhang <guoyizhang at malacology dot net> _pkgname=glmmTMB _pkgver=1.1.7 pkgname=r-${_pkgname,,} -pkgver=1.1.7 -pkgrel=1 -pkgdesc='Generalized Linear Mixed Models using Template Model Builder' -arch=('x86_64') +pkgver=${_pkgver//-/.} +pkgrel=3 +pkgdesc="Generalized Linear Mixed Models using Template Model Builder" +arch=(x86_64) url="https://cran.r-project.org/package=${_pkgname}" -license=('AGPL') +license=(AGPL3) depends=( - r r-lme4 r-numderiv - r-rcppeigen r-tmb - make +) +makedepends=( + r-rcppeigen +) +checkdepends=( + r-car + r-effects + r-emmeans + r-mvabund + r-pscl + r-testthat ) optdepends=( r-bbmle - r-boot r-broom r-broom.mixed r-car @@ -33,13 +40,10 @@ optdepends=( r-ggplot2 r-huxtable r-knitr - r-lattice - r-mass r-mlmrev r-multcomp r-mumin r-mvabund - r-parallel r-plyr r-png r-pscl @@ -50,14 +54,20 @@ optdepends=( r-xtable ) source=("https://cran.r-project.org/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +md5sums=('97dac1dddc453e0e9b5d7c072e4d4766') sha256sums=('a38be6e3b8a65a928d19970aee2b13d28535e42b97a046b2f00014f78475c1f1') build() { - R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" + mkdir -p build + R CMD INSTALL "$_pkgname" -l build +} + +check() { + cd "$_pkgname/tests" + R_LIBS="$srcdir/build" NOT_CRAN=true Rscript --vanilla AAAtest-all.R } package() { - install -dm0755 "${pkgdir}/usr/lib/R/library" - cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" + install -d "$pkgdir/usr/lib/R/library" + cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library" } -# vim:set ts=2 sw=2 et: |