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| author | Sukanka | 2022-06-06 11:40:39 +0800 |
|---|---|---|
| committer | Sukanka | 2022-06-06 11:40:39 +0800 |
| commit | 2679e8ae9671c5f1de4f1c7a6e1d51d21df6a7ba (patch) | |
| tree | aff8178b058ae58f8ac1e2c1890abedbd383c3f7 /PKGBUILD | |
| download | aur-2679e8ae9671c5f1de4f1c7a6e1d51d21df6a7ba.tar.gz | |
add r-granulator
Diffstat (limited to 'PKGBUILD')
| -rw-r--r-- | PKGBUILD | 47 |
1 files changed, 47 insertions, 0 deletions
diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..49a610a38f5e --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,47 @@ +# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> + +_pkgname=granulator +_pkgver=1.4.0 +pkgname=r-${_pkgname,,} +pkgver=1.4.0 +pkgrel=1 +pkgdesc='Rapid benchmarking of methods for *in silico* deconvolution of bulk RNA-seq data' +arch=('any') +url="https://bioconductor.org/packages/${_pkgname}" +license=('GPL') +depends=( + r + r-cowplot + r-dplyr + r-dtangle + r-e1071 + r-epir + r-ggplot2 + r-ggplotify + r-limsolve + r-magrittr + r-nnls + r-pheatmap + r-purrr + r-rlang + r-tibble + r-tidyr +) +optdepends=( + r-biocstyle + r-knitr + r-rmarkdown + r-testthat +) +source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +sha256sums=('ba84848ead7ea99a4be9bf9697f3bde966d96038f5b9ccc6699c8d97d93c802f') + +build() { + R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" +} + +package() { + install -dm0755 "${pkgdir}/usr/lib/R/library" + cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" +} +# vim:set ts=2 sw=2 et: |