add r-mapkl

1 files changed, 44 insertions, 0 deletions

diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..2702e97fd0cb
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,44 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=mAPKL
+_pkgver=1.26.0
+pkgname=r-${_pkgname,,}
+pkgver=1.26.0
+pkgrel=1
+pkgdesc='A Hybrid Feature Selection method for gene expression data'
+arch=('any')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('GPL')
+depends=(
+  r
+  r-annotationdbi
+  r-apcluster
+  r-biobase
+  r-clustersim
+  r-e1071
+  r-igraph
+  r-limma
+  r-multtest
+  r-parmigene
+  r-reactome.db
+)
+optdepends=(
+  r-biocgenerics
+  r-biocstyle
+  r-hgu133plus2.db
+  r-knitr
+  r-mapkldata
+  r-runit
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('3a5c0145990bfe4174cdd27c137c614060402fea120cc3429de645ad256fee7f')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et: