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authorBioArchLinuxBot2022-11-12 16:08:27 +0000
committerBioArchLinuxBot2022-11-12 16:08:27 +0000
commit73953d4df32ef2984b8b57d567ef749a2e04c611 (patch)
treeba7b567892d784a077803807a1226ea458410bd0 /PKGBUILD
parent27a145366fb1f8e40c762d5453011759ef6353e7 (diff)
downloadaur-73953d4df32ef2984b8b57d567ef749a2e04c611.tar.gz
[lilac] updated to 1.8.0-1
Diffstat (limited to 'PKGBUILD')
-rw-r--r--PKGBUILD12
1 files changed, 7 insertions, 5 deletions
diff --git a/PKGBUILD b/PKGBUILD
index 9b42bc8cbffe..114538adab23 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -1,9 +1,9 @@
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=MethReg
-_pkgver=1.6.0
+_pkgver=1.8.0
pkgname=r-${_pkgname,,}
-pkgver=1.6.0
+pkgver=1.8.0
pkgrel=1
pkgdesc='Assessing the regulatory potential of DNA methylation regions or sites on gene transcription'
arch=('any')
@@ -11,8 +11,10 @@ url="https://bioconductor.org/packages/${_pkgname}"
license=('GPL')
depends=(
r
+ r-annotationhub
r-delayedarray
r-dplyr
+ r-experimenthub
r-genomicranges
r-ggplot2
r-ggpubr
@@ -23,13 +25,13 @@ depends=(
r-readr
r-rlang
r-s4vectors
+ r-sesame
r-sesamedata
r-sfsmisc
r-stringr
r-summarizedexperiment
r-tibble
r-tidyr
- r-sesame
)
optdepends=(
r-biocfilecache
@@ -41,7 +43,7 @@ optdepends=(
r-dorothea
r-downloader
r-htmltools
- r-jaspar2020
+ r-jaspar2022
r-jpeg
r-knitr
r-matrixstats
@@ -57,7 +59,7 @@ optdepends=(
r-viper
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
-sha256sums=('04c8b9aabfce93ebc133f2dd046c2e30ff001c92924a990daead194c64b36384')
+sha256sums=('6efcb33f6a274da3050f7184d25b10e905e44aacda03afde7606545975567f27')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"