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authorBioArchLinuxBot2023-10-27 11:26:38 +0000
committerBioArchLinuxBot2023-10-27 11:26:38 +0000
commit013373c3c8684eb6b9666e40adfd54db5c94efc5 (patch)
tree30e9b3b0a6b45eb7a807e8b459d709960b3d5a07 /PKGBUILD
parentdc6ad3bb6ad57238d1f905b9a075afed35bb88f4 (diff)
downloadaur-013373c3c8684eb6b9666e40adfd54db5c94efc5.tar.gz
[lilac] updated to 1.22.0-1
Diffstat (limited to 'PKGBUILD')
-rw-r--r--PKGBUILD11
1 files changed, 8 insertions, 3 deletions
diff --git a/PKGBUILD b/PKGBUILD
index 3b71161ab3a7..df1644be90a9 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -1,9 +1,9 @@
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=ORFik
-_pkgver=1.20.2
+_pkgver=1.22.0
pkgname=r-${_pkgname,,}
-pkgver=1.20.2
+pkgver=1.22.0
pkgrel=1
pkgdesc='Open Reading Frames in Genomics'
arch=('x86_64')
@@ -19,8 +19,10 @@ depends=(
r-biostrings
r-bsgenome
r-cowplot
+ r-curl
r-data.table
r-deseq2
+ r-downloader
r-fst
r-genomeinfodb
r-genomicalignments
@@ -33,10 +35,13 @@ depends=(
r-jsonlite
r-r.utils
r-rcpp
+ r-rcurl
r-rsamtools
r-rtracklayer
r-s4vectors
r-summarizedexperiment
+ r-withr
+ r-xml
r-xml2
)
optdepends=(
@@ -47,7 +52,7 @@ optdepends=(
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
-sha256sums=('891e3ff7950fc2c46bcab1aa4b2b4695ae20b27705f41ef1aea609f54188afe1')
+sha256sums=('88d782956bbca1a662cd39059126225a4ca78114ca6e7b8d932f3315b6925e11')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"