add r-organism.dplyr

1 files changed, 51 insertions, 0 deletions

diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..a73f2747d1ea
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,51 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=Organism.dplyr
+_pkgver=1.24.0
+pkgname=r-${_pkgname,,}
+pkgver=1.24.0
+pkgrel=3
+pkgdesc='dplyr-based Access to Bioconductor Annotation Resources'
+arch=('any')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('Artistic2.0')
+depends=(
+  r
+  r-annotationdbi
+  r-annotationfilter
+  r-biocfilecache
+  r-dbi
+  r-dbplyr
+  r-dplyr
+  r-genomeinfodb
+  r-genomicfeatures
+  r-genomicranges
+  r-iranges
+  r-rlang
+  r-rsqlite
+  r-s4vectors
+  r-tibble
+)
+optdepends=(
+  r-biocstyle
+  r-ggplot2
+  r-knitr
+  r-org.hs.eg.db
+  r-org.mm.eg.db
+  r-rmarkdown
+  r-testthat
+  r-txdb.hsapiens.ucsc.hg38.knowngene
+  r-txdb.mmusculus.ucsc.mm10.ensgene
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('5a95b2c081a4e9409980c716f576ade0df6dcee8fd0432382f8419d30a724948')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et: