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author | Sukanka | 2022-06-06 17:54:45 +0800 |
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committer | Sukanka | 2022-06-06 17:54:45 +0800 |
commit | 0d74410cfdbfb51fecefc1c508fe901feafae4e7 (patch) | |
tree | 2eeacb182a903c8f598615c0ca13a3ccb589ed47 /PKGBUILD | |
download | aur-0d74410cfdbfb51fecefc1c508fe901feafae4e7.tar.gz |
add r-panvizgenerator
Diffstat (limited to 'PKGBUILD')
-rw-r--r-- | PKGBUILD | 38 |
1 files changed, 38 insertions, 0 deletions
diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..7afb4c7722dc --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,38 @@ +# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> + +_pkgname=PanVizGenerator +_pkgver=1.22.0 +pkgname=r-${_pkgname,,} +pkgver=1.22.0 +pkgrel=2 +pkgdesc='Generate PanViz visualisations from your pangenome' +arch=('any') +url="https://bioconductor.org/packages/${_pkgname}" +license=('GPL') +depends=( + r + r-findmyfriends + r-igraph + r-jsonlite + r-pcamethods + r-shiny +) +optdepends=( + r-biocstyle + r-digest + r-knitr + r-rmarkdown + r-testthat +) +source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +sha256sums=('4d0ccdf162d78f8bf7bc676862b104b61c401682d999b001a02bb15998141d66') + +build() { + R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" +} + +package() { + install -dm0755 "${pkgdir}/usr/lib/R/library" + cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" +} +# vim:set ts=2 sw=2 et: |