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authorBioArchLinuxBot2024-02-14 18:04:12 +0000
committerBioArchLinuxBot2024-02-14 18:04:12 +0000
commita2a5c5dd0052baca0edc889bc32ec9ebdedfd00b (patch)
treef92a0c1831801d6e041e446295d4c9548d74bbaf /PKGBUILD
parent72110143910830a624a702718f0b731433d7137a (diff)
downloadaur-r-rcistarget.tar.gz
[lilac] updated to 1.20.0-2
Diffstat (limited to 'PKGBUILD')
-rw-r--r--PKGBUILD29
1 files changed, 13 insertions, 16 deletions
diff --git a/PKGBUILD b/PKGBUILD
index 61068b6c0314..f4ca8b1f4698 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -3,14 +3,13 @@
_pkgname=RcisTarget
_pkgver=1.20.0
pkgname=r-${_pkgname,,}
-pkgver=1.20.0
-pkgrel=1
-pkgdesc='RcisTarget Identify transcription factor binding motifs enriched on a list of genes or genomic regions'
-arch=('any')
-url="https://bioconductor.org/packages/${_pkgname}"
-license=('GPL')
+pkgver=${_pkgver//-/.}
+pkgrel=2
+pkgdesc="RcisTarget Identify transcription factor binding motifs enriched on a list of genes or genomic regions"
+arch=(any)
+url="https://bioconductor.org/packages/$_pkgname"
+license=('GPL-3.0-only')
depends=(
- r
r-arrow
r-aucell
r-biocgenerics
@@ -28,9 +27,7 @@ optdepends=(
r-biobase
r-biocparallel
r-biocstyle
- r-domc
r-doparallel
- r-dorng
r-dt
r-foreach
r-gplots
@@ -41,17 +38,17 @@ optdepends=(
r-rtracklayer
r-testthat
r-visnetwork
- r-zoo
)
-source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
-sha256sums=('b4db98a76dd45d264cefd74bbfc0436d863f69b71d25f3762e2959570bf2e236')
+source=("https://bioconductor.org/packages/3.17/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+md5sums=('0f7605c0a9396d116b777b4954011027')
+b2sums=('c566bd26dd1a7fbec7628d048d4d5d533c34a893c08eddfdd441ff9cfd57af727d99f31e7993e0e6f6a7cb59bc779e22a7da84cdb7a73cbfe4bc7a00c9b5ba90')
build() {
- R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+ mkdir build
+ R CMD INSTALL -l build "$_pkgname"
}
package() {
- install -dm0755 "${pkgdir}/usr/lib/R/library"
- cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+ install -d "$pkgdir/usr/lib/R/library"
+ cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
}
-# vim:set ts=2 sw=2 et: