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| author | Sukanka | 2022-06-06 21:59:40 +0800 |
|---|---|---|
| committer | Sukanka | 2022-06-06 21:59:40 +0800 |
| commit | c2bd6a8061a31fc335d2097a59e7376528cbcb09 (patch) | |
| tree | dfb1ac0b62470230482c8eecdd4dccd22a19c349 /PKGBUILD | |
| download | aur-c2bd6a8061a31fc335d2097a59e7376528cbcb09.tar.gz | |
add r-saturn
Diffstat (limited to 'PKGBUILD')
| -rw-r--r-- | PKGBUILD | 45 |
1 files changed, 45 insertions, 0 deletions
diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..951b631403a9 --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,45 @@ +# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> + +_pkgname=satuRn +_pkgver=1.4.0 +pkgname=r-${_pkgname,,} +pkgver=1.4.0 +pkgrel=1 +pkgdesc='Scalable Analysis of Differential Transcript Usage for Bulk and Single-Cell RNA-sequencing Applications' +arch=('any') +url="https://bioconductor.org/packages/${_pkgname}" +license=('Artistic2.0') +depends=( + r + r-biocparallel + r-ggplot2 + r-limma + r-locfdr + r-pbapply + r-summarizedexperiment +) +optdepends=( + r-annotationhub + r-biocstyle + r-covr + r-delayedarray + r-dexseq + r-edger + r-ensembldb + r-knitr + r-rmarkdown + r-stager + r-testthat +) +source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +sha256sums=('a29d343cbf6e225ee6a0048a800d0634e37ba95b4402dd32c394a369142c0f53') + +build() { + R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" +} + +package() { + install -dm0755 "${pkgdir}/usr/lib/R/library" + cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" +} +# vim:set ts=2 sw=2 et: |