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authorBioArchLinuxBot2024-02-11 18:16:20 +0000
committerBioArchLinuxBot2024-02-11 18:16:20 +0000
commit0f70986209dc214aeb88d55fbe8281772e18b2a6 (patch)
treeb028b859d5fe960fc4b328cf314f06903e1650dc /PKGBUILD
parentdc97a16608e73e865a789a3b35446becd582eb72 (diff)
downloadaur-0f70986209dc214aeb88d55fbe8281772e18b2a6.tar.gz
[lilac] updated to 1.10.0-2
Diffstat (limited to 'PKGBUILD')
-rw-r--r--PKGBUILD28
1 files changed, 15 insertions, 13 deletions
diff --git a/PKGBUILD b/PKGBUILD
index 46fe5e192f0d..1f2a43281e2c 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -3,14 +3,13 @@
_pkgname=SCATEData
_pkgver=1.10.0
pkgname=r-${_pkgname,,}
-pkgver=1.10.0
-pkgrel=1
-pkgdesc='Data for SCATE (Single-cell ATAC-seq Signal Extraction and Enhancement)'
-arch=('any')
-url="https://bioconductor.org/packages/${_pkgname}"
+pkgver=${_pkgver//-/.}
+pkgrel=2
+pkgdesc="Data for SCATE (Single-cell ATAC-seq Signal Extraction and Enhancement)"
+arch=(any)
+url="https://bioconductor.org/packages/$_pkgname"
license=('MIT')
depends=(
- r
r-experimenthub
r-genomicalignments
r-genomicranges
@@ -19,16 +18,19 @@ optdepends=(
r-knitr
r-rmarkdown
)
-source=("https://bioconductor.org/packages/release/data/experiment/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
-sha256sums=('037cf1bb07580c11c9ba8e5a4b5dab27fb7908e8fdea7337bf2da5c766451e5c')
+source=("https://bioconductor.org/packages/3.17/data/experiment/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+md5sums=('dd2241d946202b696c0a706b906425f4')
+b2sums=('a3e8aeaa2a5de51ccb7aadd2e840c419138f279b13c1feec7e445036785ddcd25af77cd5b9ec2dfbd77aa9f3e309dbdb6fc9288a763de8682f90bbcd6cf58757')
build() {
- R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+ mkdir build
+ R CMD INSTALL -l build "$_pkgname"
}
package() {
- install -dm0755 "${pkgdir}/usr/lib/R/library"
- cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
- install -Dm644 "${_pkgname}/LICENSE" -t "${pkgdir}/usr/share/licenses/${pkgname}"
+ install -d "$pkgdir/usr/lib/R/library"
+ cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
+
+ install -d "$pkgdir/usr/share/licenses/$pkgname"
+ ln -s "/usr/lib/R/library/$_pkgname/LICENSE" "$pkgdir/usr/share/licenses/$pkgname"
}
-# vim:set ts=2 sw=2 et: