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| author | Sukanka | 2022-06-06 22:14:07 +0800 |
|---|---|---|
| committer | Sukanka | 2022-06-06 22:14:07 +0800 |
| commit | 6d360f70ab0c4ae3f0aa12a38718eca5ca619573 (patch) | |
| tree | 232f988b74b1e983ec0b8a96afc2eee42ec24a7e /PKGBUILD | |
| download | aur-6d360f70ab0c4ae3f0aa12a38718eca5ca619573.tar.gz | |
add r-scde
Diffstat (limited to 'PKGBUILD')
| -rw-r--r-- | PKGBUILD | 48 |
1 files changed, 48 insertions, 0 deletions
diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..7d4ffd08d914 --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,48 @@ +# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> + +_pkgname=scde +_pkgver=2.24.0 +pkgname=r-${_pkgname,,} +pkgver=2.24.0 +pkgrel=1 +pkgdesc='Single Cell Differential Expression' +arch=('x86_64') +url="https://bioconductor.org/packages/${_pkgname}" +license=('GPL') +depends=( + r + r-biocparallel + r-cairo + r-edger + r-extremes + r-flexmix + r-pcamethods + r-quantreg + r-rcolorbrewer + r-rcpp + r-rcpparmadillo + r-rjson + r-rmtstat + r-rook +) +optdepends=( + r-cba + r-fastcluster + r-go.db + r-knitr + r-org.hs.eg.db + r-rmarkdown + r-wgcna +) +source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +sha256sums=('6fbcb9f3751fc480ae0026ba552eff0884cfcdc75e4f429d260f02b4bb83991c') + +build() { + R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" +} + +package() { + install -dm0755 "${pkgdir}/usr/lib/R/library" + cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" +} +# vim:set ts=2 sw=2 et: |