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| author | Sukanka | 2022-06-06 22:19:49 +0800 |
|---|---|---|
| committer | Sukanka | 2022-06-06 22:19:49 +0800 |
| commit | 16d1e92cbe7b2cf919317b7bc7daa277838a475e (patch) | |
| tree | f5b30b53db25b2fcbaf8d66a173a56a7b8d246e8 /PKGBUILD | |
| download | aur-16d1e92cbe7b2cf919317b7bc7daa277838a475e.tar.gz | |
add r-scnorm
Diffstat (limited to 'PKGBUILD')
| -rw-r--r-- | PKGBUILD | 42 |
1 files changed, 42 insertions, 0 deletions
diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..5803b521c024 --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,42 @@ +# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> + +_pkgname=SCnorm +_pkgver=1.18.0 +pkgname=r-${_pkgname,,} +pkgver=1.18.0 +pkgrel=1 +pkgdesc='Normalization of single cell RNA-seq data' +arch=('any') +url="https://bioconductor.org/packages/${_pkgname}" +license=('GPL') +depends=( + r + r-biocgenerics + r-biocparallel + r-data.table + r-forcats + r-ggplot2 + r-moments + r-quantreg + r-s4vectors + r-singlecellexperiment + r-summarizedexperiment +) +optdepends=( + r-biocstyle + r-devtools + r-knitr + r-rmarkdown +) +source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +sha256sums=('ade0254cac5009f6b5112615122f1623fcd0f9210fd966280c8ca9a9ecf1a12d') + +build() { + R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" +} + +package() { + install -dm0755 "${pkgdir}/usr/lib/R/library" + cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" +} +# vim:set ts=2 sw=2 et: |