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| author | Sukanka | 2022-06-07 00:30:47 +0800 |
|---|---|---|
| committer | Sukanka | 2022-06-07 00:30:47 +0800 |
| commit | 7ed45a5d9e7d10b2732f53b1eb02b80d9b7a9122 (patch) | |
| tree | 34e95a0de3e7f4c872dc979f66ed58fadd913792 /PKGBUILD | |
| download | aur-7ed45a5d9e7d10b2732f53b1eb02b80d9b7a9122.tar.gz | |
add r-splatter
Diffstat (limited to 'PKGBUILD')
| -rw-r--r-- | PKGBUILD | 71 |
1 files changed, 71 insertions, 0 deletions
diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..27a0f3a733a3 --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,71 @@ +# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> + +_pkgname=splatter +_pkgver=1.20.0 +pkgname=r-${_pkgname,,} +pkgver=1.20.0 +pkgrel=1 +pkgdesc='Simple Simulation of Single-cell RNA Sequencing Data' +arch=('any') +url="https://bioconductor.org/packages/${_pkgname}" +license=('GPL') +depends=( + r + r-biocgenerics + r-biocparallel + r-checkmate + r-crayon + r-edger + r-fitdistrplus + r-ggplot2 + r-locfit + r-matrixstats + r-s4vectors + r-scales + r-scater + r-singlecellexperiment + r-summarizedexperiment +) +optdepends=( + r-basics + r-biocmanager + r-biocsingular + r-biocstyle + r-biostrings + r-covr + r-cowplot + r-genomeinfodb + r-genomicranges + r-igraph + r-iranges + r-knitr + r-limsolve + r-lme4 + r-magick + r-mfa + r-phenopath + r-preprocesscore + r-progress + r-pscl + r-rmarkdown + r-scdd + r-scran + r-scuttle + r-sparsedc + r-spelling + r-testthat + r-variantannotation + r-zinbwave +) +source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +sha256sums=('0eaf0ef914c0a8fdffe6ddaff6dc98441a4a9016fb26972cd03faaae65e005ae') + +build() { + R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" +} + +package() { + install -dm0755 "${pkgdir}/usr/lib/R/library" + cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" +} +# vim:set ts=2 sw=2 et: |