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author | Sukanka | 2022-06-07 00:34:07 +0800 |
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committer | Sukanka | 2022-06-07 00:34:07 +0800 |
commit | 8bc036090bd6cdd54fd7ec6d2fd13456c8bc5da3 (patch) | |
tree | 93f9aecc12ed87704e728a694953fbbfd68b1ab6 /PKGBUILD | |
download | aur-8bc036090bd6cdd54fd7ec6d2fd13456c8bc5da3.tar.gz |
add r-sponge
Diffstat (limited to 'PKGBUILD')
-rw-r--r-- | PKGBUILD | 64 |
1 files changed, 64 insertions, 0 deletions
diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..abcb571c4b03 --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,64 @@ +# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> + +_pkgname=SPONGE +_pkgver=1.18.1 +pkgname=r-${_pkgname,,} +pkgver=1.18.1 +pkgrel=1 +pkgdesc='Sparse Partial Correlations On Gene Expression' +arch=('any') +url="https://bioconductor.org/packages/${_pkgname}" +license=('GPL') +depends=( + r + r-biobase + r-data.table + r-dorng + r-expm + r-foreach + r-glmnet + r-grbase + r-igraph + r-iterators + r-logging + r-ppcor + r-tidyverse + r-caret + r-dplyr + r-biomart + r-randomforest + r-ggridges + r-cvms + r-mirbaseconverter + r-complexheatmap + r-ggplot2 + r-metbrewer + r-rlang + r-tnet + r-ggpubr + r-stringr + r-tidyr +) +optdepends=( + r-bigmemory + r-digest + r-doparallel + r-ggrepel + r-gridextra + r-knitr + r-rmarkdown + r-testthat + r-visnetwork +) +source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +sha256sums=('cd6a8c034b631213b9ea6ccc71644ad28c41c9897224748ee888edc60c493c1c') + +build() { + R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" +} + +package() { + install -dm0755 "${pkgdir}/usr/lib/R/library" + cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" +} +# vim:set ts=2 sw=2 et: |