add r-triplex

1 files changed, 37 insertions, 0 deletions

diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..c685a23a05f1
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,37 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=triplex
+_pkgver=1.36.0
+pkgname=r-${_pkgname,,}
+pkgver=1.36.0
+pkgrel=1
+pkgdesc='Search and visualize intramolecular triplex-forming sequences in DNA'
+arch=('x86_64')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('BSD')
+depends=(
+  r
+  r-biostrings
+  r-genomicranges
+  r-iranges
+  r-s4vectors
+  r-xvector
+)
+optdepends=(
+  r-bsgenome.celegans.ucsc.ce10
+  r-rgl
+  r-rtracklayer
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('08bf4e0c1ddb048cf356037133fe86072c9919e23adfdc360c82efbc37a8ce1f')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+  install -Dm644 "${_pkgname}/LICENSE" -t "${pkgdir}/usr/share/licenses/${pkgname}"
+}
+# vim:set ts=2 sw=2 et: