add r-tripr

1 files changed, 62 insertions, 0 deletions

diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..3f2943861f45
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,62 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=tripr
+_pkgver=1.2.0
+pkgname=r-${_pkgname,,}
+pkgver=1.2.0
+pkgrel=1
+pkgdesc='T-cell Receptor/Immunoglobulin Profiler (TRIP)'
+arch=('any')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('MIT')
+depends=(
+  r
+  r-config
+  r-data.table
+  r-dplyr
+  r-dt
+  r-golem
+  r-gridextra
+  r-plot3d
+  r-plotly
+  r-plyr
+  r-pryr
+  r-rcolorbrewer
+  r-shiny
+  r-shinybs
+  r-shinyfiles
+  r-shinyjs
+  r-stringdist
+  r-stringr
+)
+optdepends=(
+  r-biocgenerics
+  r-biocmanager
+  r-biocstyle
+  r-biocthis
+  r-biostrings
+  r-fs
+  r-knitr
+  r-motifstack
+  r-parallel
+  r-refmanager
+  r-rlist
+  r-rmarkdown
+  r-shinycssloaders
+  r-testthat
+  r-tidyverse
+  r-xtable
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('078310a356783234075764be67afab09e3c11f01b4a336e8fa474120e0c7be6c')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+  install -Dm644 "${_pkgname}/LICENSE" -t "${pkgdir}/usr/share/licenses/${pkgname}"
+}
+# vim:set ts=2 sw=2 et: