Initial commit

1 files changed, 41 insertions, 0 deletions

diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..55167d158cc8
--- /dev/null
+++ b/PKGBUILD
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+# Maintainer: Mick Elliot <micke at sfu dot ca>
+# Contributor: Ronny Lorenz < ronny at tbi.univie.ac.at >
+# Contributor: Mick Elliot <micke at sfu dot ca>
+
+pkgname=readseq
+pkgver=2.1.30
+origver=2.1.27
+pkgrel=2
+pkgdesc="A biosequence data format conversion tool"
+arch=('i686' 'x86_64')
+url="http://iubio.bio.indiana.edu/soft/molbio/${pkgname}/java/"
+license=('custom')
+depends=('java-runtime' 'bash')
+source=(  "${url}${pkgname}.jar"
+          "${url}${pkgname}-help.html"
+          "${url}Readseq2-help.html"
+          "readseq.sh"
+          "license"
+          "arch-readseq.readme")
+
+md5sums=('0b40df0f7e1283e03c09bfcf70cb381c'
+         'd1a73902a66a6b210e751be9d0e8e6c6'
+         '389be807c8037976b6ae06a9ebe178aa'
+         '177bad15a8f79db2678850ac3718973f'
+         '51fb18f9b72171d0943807fce97d3cab'
+         '72f9ff0c2e17eab8883c09ec98bf0e91')
+
+package() {
+  # cd $startdir/src/
+  install -D -m755 readseq.sh "${pkgdir}/usr/bin/${pkgname}"
+  chmod +x "${pkgdir}/usr/bin/${pkgname}"
+  install -D -m644 license "${pkgdir}/usr/share/licenses/${pkgname}/license"
+  install -D -m644 ${pkgname}.jar "${pkgdir}/usr/share/java/${pkgname}/${pkgname}.jar"
+  install -D -m644 ${pkgname}-help.html "${pkgdir}/usr/share/doc/${pkgname}/${pkgname}-help.html"
+  install -D -m644 Readseq2-help.html "${pkgdir}/usr/share/doc/${pkgname}/${pkgname}2-help.html"
+  install -D -m644 arch-readseq.readme "${pkgdir}/usr/share/doc/${pkgname}/arch-readseq.readme"
+  echo "***************************************************************************"
+  echo "Documentation and arch-specific instructions are in /usr/share/doc/readseq/"
+  echo "***************************************************************************"
+}
+