Initial import

1 files changed, 33 insertions, 0 deletions

diff --git a/PKGBUILD b/PKGBUILD
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+# Maintainer: Sauliusl <luksaulius[at]gmail[dot]com>
+pkgname=rseg
+pkgver=0.4.4
+pkgrel=1
+pkgdesc="The RSEG software package is aimed to analyze ChIP-Seq data, especially for identifying genomic regions and their boundaries marked by diffusive histone modification markers, such as H3K36me3 and H3K27me3."
+url="http://smithlabresearch.org/software/rseg/"
+arch=('x86_64' 'i686')
+license=('GPL3')
+depends=('gsl')
+optdepends=()
+makedepends=('gsl')
+conflicts=()
+replaces=()
+backup=()
+install=''
+source=("http://smithlabresearch.org/downloads/${pkgname}-${pkgver}.tar.gz")
+sha256sums=('6b23b570097d449b910fba3244e0330729fa409995fbcc1b4890a99ee52891f2')
+
+build() {
+  cd "${srcdir}/${pkgname}-${pkgver}"
+  make
+  make install # This just puts files into bin/ directory
+}
+
+package() {
+  cd "${srcdir}/${pkgname}-${pkgver}/bin"
+  install -d "${pkgdir}/usr/bin"
+  install -Dm755 * "${pkgdir}/usr/bin/"
+  # Rename the join utility so it does not clash with the one already in system
+  mv "${pkgdir}/usr/bin/join" "${pkgdir}/usr/bin/rseg-join"
+}
+
+# vim:set ts=2 sw=2 et:
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