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authorDrobot Viktor2019-04-09 17:44:15 +0300
committerDrobot Viktor2019-04-09 17:44:15 +0300
commitd642ad57d9c7af2166badd3d7ddbf79bca6f9950 (patch)
tree84218d4a91da887a6c97e8fd514d739ca811e728 /amber_dat.patch
parent73049794b22916b8e95fe679dd8e4803d24a5c4f (diff)
downloadaur-d642ad57d9c7af2166badd3d7ddbf79bca6f9950.tar.gz
Extended AMBER forcefield. Added profile script
Diffstat (limited to 'amber_dat.patch')
-rw-r--r--amber_dat.patch36
1 files changed, 36 insertions, 0 deletions
diff --git a/amber_dat.patch b/amber_dat.patch
new file mode 100644
index 000000000000..e4ef9aec4609
--- /dev/null
+++ b/amber_dat.patch
@@ -0,0 +1,36 @@
+--- AMBER.DAT 2019-04-05 21:38:47.000000000 +0300
++++ AMBER.DAT 2019-04-09 14:03:29.712379551 +0300
+@@ -2257,3 +2257,33 @@
+ RUN H3T 0.437600 0.0000 HO
+ WAT HW 0.417000 0.0000 HW
+ WAT OW -0.834000 1.6612 OW
++NTS N -0.920500 1.8240 N3
++NTS H1 0.362800 0.6000 H
++NTS H2 0.362800 0.6000 H
++NTS CA 0.029300 1.9080 CT
++NTS HA 0.104200 1.3870 H1
++NTS CB 0.075000 1.9080 CT
++NTS HB2 0.073700 1.3870 H1
++NTS HB3 0.073700 1.3870 H1
++NTS OG -0.619500 1.7210 OH
++NTS HG 0.414400 0.0000 HO
++NTS C 0.616300 1.9080 C
++NTS O -0.572200 1.6612 O
++BAS N -0.937900 1.8240 NT
++BAS H1 0.379400 0.6000 H
++BAS H2 0.379400 0.6000 H
++BAS CA 0.071300 1.9080 CX
++BAS HA 0.137400 1.3870 H1
++BAS CB 0.091800 1.9080 CT
++BAS HB2 0.041800 1.3870 H1
++BAS HB3 0.041800 1.3870 H1
++BAS OG -0.367800 1.6837 OS
++BAS CD 0.779500 1.9080 C
++BAS CE2 -0.534700 1.9080 CT
++BAS HE2 0.261100 1.3870 H1
++BAS HE3 0.261100 1.3870 H1
++BAS BR -0.059200 2.22 Br
++BAS OE1 -0.535000 1.6612 O
++BAS C 0.527200 1.9080 C
++BAS O -0.537200 1.6612 O
++CA CA 2.0 1.649 Ca2+