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-rw-r--r--.SRCINFO259
1 files changed, 257 insertions, 2 deletions
diff --git a/.SRCINFO b/.SRCINFO
index 9cd1c9e3064..984eeda2150 100644
--- a/.SRCINFO
+++ b/.SRCINFO
@@ -1,7 +1,7 @@
pkgbase = imod-binary
- pkgdesc = image processing, modeling and display programs for tomography and 3D reconstruction
+ pkgdesc = Image-Processing, Modeling and Display Programs for Tomography and 3D Reconstruction
pkgver = 4.9.10
- pkgrel = 1
+ pkgrel = 2
url = http://bio3d.colorado.edu/imod/
arch = x86_64
license = GPL
@@ -9,9 +9,264 @@ pkgbase = imod-binary
depends = python
optdepends = cuda>=8.0.0: for library bindings
optdepends = tcsh: for only a few very specializied scripts
+ provides = 3dmod
+ provides = 3dmodv
+ provides = addtostack
+ provides = adocxmlconv
+ provides = alignframes
+ provides = alignlog
+ provides = alterheader
+ provides = archiveorig
+ provides = assemblevol
+ provides = autofidseed
+ provides = autopatchfit
+ provides = avganova
+ provides = avgstack
+ provides = avgstatplot
+ provides = b3dcatfiles
+ provides = b3dcopy
+ provides = b3dhostname
+ provides = b3dremove
+ provides = b3dtouch
+ provides = b3dwinps
+ provides = batchruntomo
+ provides = beadtrack
+ provides = binvol
+ provides = blendmont
+ provides = boxavg
+ provides = boxstartend
+ provides = calc
+ provides = ccderaser
+ provides = checkmtmod
+ provides = checkxforms
+ provides = chunksetup
+ provides = clip
+ provides = clipmodel
+ provides = clonemodel
+ provides = clonevolume
+ provides = collectmmm
+ provides = colornewst
+ provides = combinefft
+ provides = contourmod
+ provides = convertmod
+ provides = copyheader
+ provides = copytomocoms
+ provides = corrsearch3d
+ provides = cryoposition
+ provides = ctfphaseflip
+ provides = ctfplotter
+ provides = densmatch
+ provides = densnorm
+ provides = dm2mrc
+ provides = dm3props
+ provides = dualvolmatch
+ provides = echo2
+ provides = edgeeraser
+ provides = edgemtf
+ provides = edgepatches
+ provides = edmont
+ provides = edpiecepoint
+ provides = endmodel
+ provides = enhance
+ provides = eraser
+ provides = etomo
+ provides = etomo.jar
+ provides = etomoPluginDemo
+ provides = excise
+ provides = excludeviews
+ provides = expandargs
+ provides = extposition
+ provides = extractmagrad
+ provides = extractpieces
+ provides = extracttilts
+ provides = extstack
+ provides = fenestra
+ provides = fftrans
+ provides = fiberpitch
+ provides = filltomo
+ provides = filterplot
+ provides = findbeads3d
+ provides = findcontrast
+ provides = finddistort
+ provides = findgradient
+ provides = findhotpixels
+ provides = findsection
+ provides = findsirtdiffs
+ provides = findwarp
+ provides = finishjoin
+ provides = fitpatches
+ provides = fixboundaries
+ provides = fixmont
+ provides = flattenwarp
+ provides = framewatcher
+ provides = genhstplt
+ provides = goodframe
+ provides = gpumonitor
+ provides = gputilttest
+ provides = header
+ provides = howflared
+ provides = idfprocess
+ provides = imavgstat
provides = imod
+ provides = imod2meta
+ provides = imod2obj
+ provides = imod2patch
+ provides = imod2rib
+ provides = imod2vrml
+ provides = imod2vrml2
+ provides = imodauto
+ provides = imodchopconts
+ provides = imodcpuload
+ provides = imodcurvature
+ provides = imod-dist
+ provides = imodexplode
+ provides = imodextract
+ provides = imodfillin
+ provides = imodfindbeads
+ provides = imodhelp
+ provides = imodinfo
+ provides = imodjoin
+ provides = imodkillgroup
+ provides = imodmesh
+ provides = imodmop
+ provides = imodpsview
+ provides = imodqtassist
+ provides = imodsendevent
+ provides = imodsetvalues
+ provides = imodsortsurf
+ provides = imodtrans
+ provides = imoduntar
+ provides = imodv
+ provides = joinmodel
+ provides = joinwarp2model
+ provides = makecomfile
+ provides = makegradtable
+ provides = makejoincom
+ provides = makepyramid
+ provides = MarkersCorrespond
+ provides = matchorwarp
+ provides = matchrotpairs
+ provides = matchshifts
+ provides = matchvol
+ provides = maxjoinsize
+ provides = midas
+ provides = model2point
+ provides = montagesize
+ provides = mrc2tif
+ provides = mrcbyte
+ provides = mrctaper
+ provides = mrcx
+ provides = mtdetect
+ provides = mtffilter
+ provides = mtk
+ provides = mtlengths
+ provides = mtmodel
+ provides = mtoverlap
+ provides = mtpairing
+ provides = mtrotlong
+ provides = mtsmooth
+ provides = mtteach
+ provides = nad_eed_3d
+ provides = nda
+ provides = newstack
+ provides = numericdiff
+ provides = onegenplot
+ provides = onepatchcorr
+ provides = patch2imod
+ provides = patchcorr3d
+ provides = patchcrawl3d
+ provides = pickbestseed
+ provides = point2model
+ provides = preNAD
+ provides = preNID
+ provides = processchunks
+ provides = prochunks.csh
+ provides = queuechunk
+ provides = RAPTOR
+ provides = raw2mrc
+ provides = rawtiltcoords
+ provides = realscalemod
+ provides = rec2imod
+ provides = recombine
+ provides = reducecont
+ provides = reducemont
+ provides = reducemtmod
+ provides = refinematch
+ provides = remapmodel
+ provides = repackseed
+ provides = resamplemod
+ provides = restrictalign
+ provides = rotatevol
+ provides = rotmont
+ provides = runimodqtapp
+ provides = runraptor
+ provides = sampletilt
+ provides = scalemodel
+ provides = sda
+ provides = selfalign
+ provides = setlibpath
+ provides = settmpdir
+ provides = setupcombine
+ provides = setupcoms
+ provides = setuplong
+ provides = setupstitch
+ provides = sirtsetup
+ provides = slashfindspheres
+ provides = slashmasksort
+ provides = slurmCleanup.sh
+ provides = slurmInit.sh
+ provides = smoothsurf
+ provides = solvematch
+ provides = sortbeadsurfs
+ provides = splitblend
+ provides = splitcombine
+ provides = splitcorrection
+ provides = splitmrc
+ provides = splittilt
+ provides = squeezevol
+ provides = startprocess
+ provides = stitchalign
+ provides = subimage
+ provides = subimanova
+ provides = subimstat
+ provides = subm
+ provides = submfg
+ provides = subtomosetup
+ provides = subtractcurves
+ provides = sumdensity
+ provides = taperoutvol
+ provides = tapervoledge
+ provides = tif2mrc
+ provides = tilt
+ provides = tiltalign
+ provides = tiltxcorr
+ provides = tomodataplots
+ provides = tomopieces
+ provides = tomopitch
+ provides = tomosnapshot
+ provides = tomostitch
+ provides = transferfid
+ provides = trimvol
+ provides = vmstocsh
+ provides = vmstopy
+ provides = warpvol
+ provides = wmod2imod
+ provides = xcorrstack
+ provides = xf2rotmagstr
+ provides = xfalign
+ provides = xfforfidless
+ provides = xfinterstack
+ provides = xfinverse
+ provides = xfjointomo
+ provides = xfmodel
+ provides = xfproduct
+ provides = xfsimplex
+ provides = xftoxg
+ provides = xyzproj
source = https://bio3d.colorado.edu/imod/AMD64-RHEL5/imod_4.9.10_RHEL7-64_CUDA8.0.sh
+ source = imod.sh
md5sums = 09dea781cbefa60f1b8360ed622ab709
+ md5sums = 5994f7008e2b3ffd7e37339b14abb0da
pkgname = imod-binary