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-rw-r--r--.SRCINFO10
-rw-r--r--PKGBUILD25
2 files changed, 21 insertions, 14 deletions
diff --git a/.SRCINFO b/.SRCINFO
index bf41065f6b55..90e047f3d64c 100644
--- a/.SRCINFO
+++ b/.SRCINFO
@@ -1,17 +1,17 @@
pkgbase = bedtools
pkgdesc = powerful toolset for genome arithmetic
- pkgver = 2.29.2
+ pkgver = 2.31.1
pkgrel = 1
+ epoch = 1
url = https://github.com/arq5x/bedtools2
arch = i686
arch = x86_64
license = GPL2
- checkdepends = python
checkdepends = samtools
+ makedepends = python
depends = bash
depends = zlib
- source = https://github.com/arq5x/bedtools2/releases/download/v2.29.2/bedtools-2.29.2.tar.gz
- sha1sums = ed08e3ca549d6a732fd3b0a1f1c05774a84cbb8c
+ source = https://github.com/arq5x/bedtools2/releases/download/v2.31.1/bedtools-2.31.1.tar.gz
+ sha1sums = 5b6a19564164613bced1f7efc07a081dd3bab6cb
pkgname = bedtools
-
diff --git a/PKGBUILD b/PKGBUILD
index ea33c2cf3799..1c81138f37ae 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -1,15 +1,22 @@
# Maintainer: Piotr Balwierz
pkgname=bedtools
-pkgver=2.29.2
+pkgver=2.31.1
+epoch=1
pkgrel=1
pkgdesc='powerful toolset for genome arithmetic'
arch=('i686' 'x86_64')
url="https://github.com/arq5x/bedtools2"
license=('GPL2')
depends=('bash' 'zlib')
-checkdepends=('python' 'samtools')
+makedepends=('python')
+checkdepends=('samtools')
source=("https://github.com/arq5x/bedtools2/releases/download/v$pkgver/$pkgname-$pkgver.tar.gz")
-sha1sums=('ed08e3ca549d6a732fd3b0a1f1c05774a84cbb8c')
+sha1sums=('5b6a19564164613bced1f7efc07a081dd3bab6cb')
+
+prepare(){
+ cd $srcdir/${pkgname}2
+ sed -i "s@python3@python@g" Makefile
+}
build()
{
@@ -17,12 +24,12 @@ build()
make
}
-# check disabled because it requires python and samtools. Uncomment if you wish.
-# check()
-# {
- # cd $srcdir/${pkgname}2
- # make test
-# }
+#check disabled because it requires python and samtools. Uncomment if you wish.
+#~ check()
+#~ {
+ #~ cd $srcdir/${pkgname}2
+ #~ make test
+#~ }
package()
{