diff options
| -rw-r--r-- | .SRCINFO | 10 | ||||
| -rw-r--r-- | PKGBUILD | 18 |
2 files changed, 15 insertions, 13 deletions
@@ -1,16 +1,14 @@ -# Generated by mksrcinfo v8 -# Fri Jan 5 00:29:10 UTC 2018 pkgbase = bowtie pkgdesc = Bowtie is an alignment tool for short nucleotide sequences against long templates - pkgver = 1.2.2 - pkgrel = 2 + pkgver = 1.2.3 + pkgrel = 1 url = http://bowtie-bio.sf.net arch = x86_64 arch = i686 license = PerlArtistic - source = https://github.com/BenLangmead/bowtie/archive/v1.2.2_p1.tar.gz + source = https://github.com/BenLangmead/bowtie/archive/v1.2.3.tar.gz source = makefile_uname.patch - sha256sums = e1b02b2e77a0d44a3dd411209fa1f44f0c4ee304ef5cc83f098275085740d5a1 + sha256sums = 86402114caeacbb3a3030509cb59f0b7e96361c7b3ee2dd50e2cd68200898823 sha256sums = 6b77e333a3ef10e3f787fd2983afd69cdb48e82347fc3316510c2ba5639742a3 pkgname = bowtie @@ -1,26 +1,30 @@ # Maintainer: Athemis <alexander.minges[at]googlemail[dot]com> # Contributor: sauliusl pkgname=bowtie -pkgver=1.2.2 -pkgrel=2 +pkgver=1.2.3 +pkgrel=1 pkgdesc="Bowtie is an alignment tool for short nucleotide sequences against long templates" url="http://bowtie-bio.sf.net" arch=('x86_64' 'i686') license=('PerlArtistic') depends=() -source=("https://github.com/BenLangmead/bowtie/archive/v${pkgver}_p1.tar.gz" +source=("https://github.com/BenLangmead/bowtie/archive/v${pkgver}.tar.gz" "makefile_uname.patch") -sha256sums=('e1b02b2e77a0d44a3dd411209fa1f44f0c4ee304ef5cc83f098275085740d5a1' +sha256sums=('86402114caeacbb3a3030509cb59f0b7e96361c7b3ee2dd50e2cd68200898823' '6b77e333a3ef10e3f787fd2983afd69cdb48e82347fc3316510c2ba5639742a3') -build() { - cd "${srcdir}/${pkgname}-${pkgver}_p1" +prepare() { + cd "${srcdir}/${pkgname}-${pkgver}" patch -Np0 -i ../makefile_uname.patch +} + +build() { + cd "${srcdir}/${pkgname}-${pkgver}" make NO_TBB=1 EXTRA_CXXFLAGS="-std=c++03" } package() { - cd "${srcdir}/${pkgname}-${pkgver}_p1" + cd "${srcdir}/${pkgname}-${pkgver}" make prefix=/usr DESTDIR="${pkgdir}" install install -d ${pkgdir}/usr/share/doc/${pkgname} install -Dm755 scripts/*.pl "${pkgdir}/usr/bin" |