diff options
| -rw-r--r-- | .SRCINFO | 7 | ||||
| -rw-r--r-- | PKGBUILD | 13 |
2 files changed, 10 insertions, 10 deletions
@@ -1,6 +1,6 @@ pkgbase = mothur pkgdesc = A bioinformatics program for analyzing microbial communities. - pkgver = 1.45.3 + pkgver = 1.46.0 pkgrel = 1 url = https://www.mothur.org/ arch = x86_64 @@ -8,8 +8,7 @@ pkgbase = mothur makedepends = boost makedepends = hdf5 depends = boost-libs - source = mothur-1.45.3.tar.gz::https://github.com/mothur/mothur/archive/v1.45.3.tar.gz - sha256sums = 865317569260ab7fa8fde2cbe00bcc05e6402dcd97267615d863ede145f381e8 + source = mothur-1.46.0.tar.gz::https://github.com/mothur/mothur/archive/v1.46.0.tar.gz + sha256sums = 0bb833b82c8841dca8cecfa58c93d537ec55f4a66d0def40916668a18baf6424 pkgname = mothur - @@ -2,7 +2,7 @@ # Contributor: Christian Krause ("wookietreiber") <christian.krause@mailbox.org> pkgname=mothur -pkgver=1.45.3 +pkgver=1.46.0 pkgrel=1 pkgdesc='A bioinformatics program for analyzing microbial communities.' arch=('x86_64') @@ -11,15 +11,16 @@ license=('GPL3') depends=('boost-libs') makedepends=('boost' 'hdf5') source=("${pkgname}-${pkgver}.tar.gz::https://github.com/${pkgname}/${pkgname}/archive/v${pkgver}.tar.gz") -sha256sums=('865317569260ab7fa8fde2cbe00bcc05e6402dcd97267615d863ede145f381e8') +sha256sums=('0bb833b82c8841dca8cecfa58c93d537ec55f4a66d0def40916668a18baf6424') prepare() { cd "${pkgname}-${pkgver}" - sed -i '87d' source/mothur.h - sed -i 's/skipUchime),/skipUchime), source\/,/g' Makefile - sed -i 's/1.45.2/1.45.3/g' Makefile Makefile_cluster -# rm splitkmerdist.cpp splitkmerdist.hpp + # I hate this so much. + sed -i '87d' source/mothur.h + sed -i '13 i \#include <memory>' source/writer.h + sed -i 's/skipUchime),/skipUchime), source\/,/g' Makefile + sed -i 's/CXXFLAGS = -O3/CXXFLAGS = -O3 -std=c++11/' source/uchime_src/makefile } build() { |