diff options
| -rw-r--r-- | .SRCINFO | 27 | ||||
| -rw-r--r-- | PKGBUILD | 23 |
2 files changed, 19 insertions, 31 deletions
@@ -1,32 +1,17 @@ pkgbase = python-q2-dada2 pkgdesc = QIIME 2 plugin wrapping DADA2 - pkgver = 2019.1.0 + pkgver = 2021.2.0.dev0 pkgrel = 1 url = https://qiime2.org - arch = any - license = BSD 3-Clause License + arch = x86_64 + license = BSD makedepends = python-setuptools depends = python-qiime2 + depends = python-q2-types depends = python-biom-format - depends = r-biobase - depends = r-biocgenerics - depends = r-biocparallel - depends = r-biostrings depends = r-dada2 - depends = r-delayedarray - depends = r-genomeinfodb - depends = r-genomeinfodbdata - depends = r-genomicalignments - depends = r-genomicranges - depends = r-iranges - depends = r-rsamtools - depends = r-s4vectors - depends = r-shortread - depends = r-summarizedexperiment - depends = r-xvector - depends = r-zlibbioc - source = https://github.com/qiime2/q2-dada2/archive/2019.1.0.tar.gz - sha256sums = 2cebca1380ea03be53c3a485ed2fb95168cbea115c3dc851c7a02b5ad59a63ac + source = python-q2-dada2-2021.2.0.dev0.tar.gz::https://github.com/qiime2/q2-dada2/archive/2021.2.0.dev0.tar.gz + sha256sums = b2d9e51338e8f89b37c4fd668b0f0fc52fb579cb7dee5ad59dc7c753dbd6f416 pkgname = python-q2-dada2 @@ -1,27 +1,30 @@ # Maintainer: Grey Christoforo <first name [at] last name [dot] net> pkgname=python-q2-dada2 -_pkgname=q2-dada2 -pkgver=2019.1.0 +pkgver=2021.2.0.dev0 pkgrel=1 pkgdesc="QIIME 2 plugin wrapping DADA2" -arch=('any') +arch=('x86_64') url="https://qiime2.org" -license=('BSD 3-Clause License') -depends=('python-qiime2' 'python-biom-format' 'r-biobase' 'r-biocgenerics' 'r-biocparallel' 'r-biostrings' 'r-dada2' 'r-delayedarray' 'r-genomeinfodb' 'r-genomeinfodbdata' 'r-genomicalignments' 'r-genomicranges' 'r-iranges' 'r-rsamtools' 'r-s4vectors' 'r-shortread' 'r-summarizedexperiment' 'r-xvector' 'r-zlibbioc') +license=('BSD') +depends=('python-qiime2' 'python-q2-types' 'python-biom-format' 'r-dada2') makedepends=('python-setuptools') -source=("https://github.com/qiime2/${_pkgname}/archive/${pkgver}.tar.gz") -sha256sums=('2cebca1380ea03be53c3a485ed2fb95168cbea115c3dc851c7a02b5ad59a63ac') +source=("${pkgname}-${pkgver}.tar.gz::https://github.com/qiime2/q2-dada2/archive/${pkgver}.tar.gz") +sha256sums=('b2d9e51338e8f89b37c4fd668b0f0fc52fb579cb7dee5ad59dc7c753dbd6f416') build() { - cd "$srcdir/$_pkgname-$pkgver" + cd "q2-dada2-$pkgver" python setup.py build } +build() { + cd "q2-dada2-$pkgver" + python setup.py test || : +} package(){ - cd "$srcdir/$_pkgname-$pkgver" - python setup.py install --root="$pkgdir/" --optimize=1 + cd "q2-dada2-$pkgver" + python setup.py install --root="$pkgdir/" --optimize=1 --skip-build } # vim:ts=2:sw=2:et: |