diff options
| -rw-r--r-- | .SRCINFO | 32 | ||||
| -rw-r--r-- | .gitignore | 4 | ||||
| -rw-r--r-- | PKGBUILD | 27 |
3 files changed, 63 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO new file mode 100644 index 000000000000..1af0231a42b9 --- /dev/null +++ b/.SRCINFO @@ -0,0 +1,32 @@ +pkgbase = python-q2-dada2 + pkgdesc = QIIME 2 plugin wrapping DADA2 + pkgver = 2019.1.0 + pkgrel = 1 + url = https://qiime2.org + arch = any + license = BSD 3-Clause License + makedepends = python-setuptools + depends = python-qiime2 + depends = python-biom-format + depends = r-biobase + depends = r-biocgenerics + depends = r-biocparallel + depends = r-biostrings + depends = r-dada2 + depends = r-delayedarray + depends = r-genomeinfodb + depends = r-genomeinfodbdata + depends = r-genomicalignments + depends = r-genomicranges + depends = r-iranges + depends = r-rsamtools + depends = r-s4vectors + depends = r-shortread + depends = r-summarizedexperiment + depends = r-xvector + depends = r-zlibbioc + source = https://github.com/qiime2/q2-dada2/archive/2019.1.0.tar.gz + sha256sums = 2cebca1380ea03be53c3a485ed2fb95168cbea115c3dc851c7a02b5ad59a63ac + +pkgname = python-q2-dada2 + diff --git a/.gitignore b/.gitignore new file mode 100644 index 000000000000..574a8578368c --- /dev/null +++ b/.gitignore @@ -0,0 +1,4 @@ +/src +/pkg +*.tar.gz +*.tar.xz diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..839913716ef6 --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,27 @@ +# Maintainer: Grey Christoforo <first name [at] last name [dot] net> + +pkgname=python-q2-dada2 +_pkgname=q2-dada2 +pkgver=2019.1.0 +pkgrel=1 +pkgdesc="QIIME 2 plugin wrapping DADA2" +arch=('any') +url="https://qiime2.org" +license=('BSD 3-Clause License') +depends=('python-qiime2' 'python-biom-format' 'r-biobase' 'r-biocgenerics' 'r-biocparallel' 'r-biostrings' 'r-dada2' 'r-delayedarray' 'r-genomeinfodb' 'r-genomeinfodbdata' 'r-genomicalignments' 'r-genomicranges' 'r-iranges' 'r-rsamtools' 'r-s4vectors' 'r-shortread' 'r-summarizedexperiment' 'r-xvector' 'r-zlibbioc') +makedepends=('python-setuptools') +source=("https://github.com/qiime2/${_pkgname}/archive/${pkgver}.tar.gz") +sha256sums=('2cebca1380ea03be53c3a485ed2fb95168cbea115c3dc851c7a02b5ad59a63ac') + +build() { + cd "$srcdir/$_pkgname-$pkgver" + python setup.py build +} + + +package(){ + cd "$srcdir/$_pkgname-$pkgver" + python setup.py install --root="$pkgdir/" --optimize=1 +} + +# vim:ts=2:sw=2:et: |