diff options
| -rw-r--r-- | .SRCINFO | 10 | ||||
| -rw-r--r-- | .gitignore | 3 | ||||
| -rw-r--r-- | PKGBUILD | 49 |
3 files changed, 45 insertions, 17 deletions
@@ -1,7 +1,7 @@ pkgbase = python-scikit-bio pkgdesc = Python package providing data structures, algorithms, and educational resources for bioinformatics - pkgver = 0.5.5 - pkgrel = 2 + pkgver = 0.5.6 + pkgrel = 1 url = https://github.com/biocore/scikit-bio arch = x86_64 license = BSD @@ -21,9 +21,11 @@ pkgbase = python-scikit-bio depends = python-requests depends = python-cachecontrol depends = python-msgpack + depends = python-scikit-learn + depends = python-hdmedians options = !emptydirs - source = https://github.com/biocore/scikit-bio/archive/0.5.5.tar.gz - md5sums = e8ec41366d9eeda9bce3ec43c2af1159 + source = python-scikit-bio-0.5.6.tar.gz::https://github.com/biocore/scikit-bio/archive/0.5.6.tar.gz + sha256sums = 69cf88626ff3803625aa65c7f6792f431318bd31f2b4d5c79e9a71cfc29c37ea pkgname = python-scikit-bio diff --git a/.gitignore b/.gitignore new file mode 100644 index 000000000000..27fd112126d4 --- /dev/null +++ b/.gitignore @@ -0,0 +1,3 @@ +src/ +pkg/ +*.tar.gz @@ -1,25 +1,48 @@ # Maintainer: Fabio Zanini <fabio.zanini _at_ fastmail.fm> -pkgname='python-scikit-bio' -pkgver=0.5.5 -pkgrel=2 +pkgname=python-scikit-bio +pkgver=0.5.6 +pkgrel=1 pkgdesc="Python package providing data structures, algorithms, and educational resources for bioinformatics" arch=('x86_64') url="https://github.com/biocore/scikit-bio" license=('BSD') -groups=() -depends=('python' 'python-future' 'python-decorator' 'python-six' 'python-contextlib2' 'python-natsort' 'python-bz2file' 'python-lockfile' 'python-pandas' 'python-scipy' 'python-numpy' 'python-matplotlib' 'python-requests' 'python-cachecontrol' 'python-msgpack') +depends=( +python +python-future +python-decorator +python-six +python-contextlib2 +python-natsort +python-bz2file +python-lockfile +python-pandas +python-scipy +python-numpy +python-matplotlib +python-requests +python-cachecontrol +python-msgpack +python-scikit-learn +python-hdmedians +) makedepends=('python-setuptools') -conflicts=() -replaces=() -backup=() options=(!emptydirs) -install= -source=("https://github.com/biocore/scikit-bio/archive/${pkgver}.tar.gz") -md5sums=('e8ec41366d9eeda9bce3ec43c2af1159') +source=("${pkgname}-${pkgver}.tar.gz::https://github.com/biocore/scikit-bio/archive/${pkgver}.tar.gz") +sha256sums=('69cf88626ff3803625aa65c7f6792f431318bd31f2b4d5c79e9a71cfc29c37ea') + +build() { + cd scikit-bio-${pkgver} + python setup.py build +} + +check(){ + cd scikit-bio-${pkgver} + python setup.py test || : +} package() { - cd "$srcdir/scikit-bio-$pkgver" - python setup.py install --root="$pkgdir/" --optimize=1 + cd scikit-bio-${pkgver} + python setup.py install --root="$pkgdir" --optimize=1 --skip-build } # vim:set ts=2 sw=2 et: |