summarylogtreecommitdiffstats
diff options
context:
space:
mode:
-rw-r--r--.SRCINFO12
-rw-r--r--PKGBUILD10
2 files changed, 13 insertions, 9 deletions
diff --git a/.SRCINFO b/.SRCINFO
index 2e9bcdf20996..32fc064c28a2 100644
--- a/.SRCINFO
+++ b/.SRCINFO
@@ -1,7 +1,7 @@
pkgbase = r-annotate
pkgdesc = Annotation for microarrays
- pkgver = 1.80.0
- pkgrel = 2
+ pkgver = 1.82.0
+ pkgrel = 1
url = https://bioconductor.org/packages/annotate
arch = any
license = Artistic-2.0
@@ -14,12 +14,14 @@ pkgbase = r-annotate
depends = r-httr
depends = r-xml
depends = r-xtable
+ optdepends = r-biocstyle
optdepends = r-biostrings
optdepends = r-genefilter
optdepends = r-go.db
optdepends = r-hgu95av2.db
optdepends = r-humanchrloc
optdepends = r-iranges
+ optdepends = r-knitr
optdepends = r-org.hs.eg.db
optdepends = r-org.mm.eg.db
optdepends = r-rae230a.db
@@ -27,8 +29,8 @@ pkgbase = r-annotate
optdepends = r-rgraphviz
optdepends = r-runit
optdepends = r-tkwidgets
- source = https://bioconductor.org/packages/release/bioc/src/contrib/annotate_1.80.0.tar.gz
- md5sums = 04d25cadc03401556364f8ca9c3b2a61
- b2sums = 9d827fd87c50bbd3812c8d370d77e0db7214a3b7c370adaab8dc7f87d1b8bfba9fe784986cb7788bfaf4815a2e1cea441e5c257f2028f0eb06cedecbffe84072
+ source = https://bioconductor.org/packages/release/bioc/src/contrib/annotate_1.82.0.tar.gz
+ md5sums = 3360e99f514042ac90eae8ff68e77e47
+ b2sums = 34dfc32b111da2f801f2e1867d9c62488be3fa6da7e0c2e1a7df05e617b9f113ee333061f291cb601906e1a75b6d3b5a8cc947fc9d43d4423a751e813f38a1a7
pkgname = r-annotate
diff --git a/PKGBUILD b/PKGBUILD
index 6e82a3a5fd7f..12c72a0b67d6 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -3,10 +3,10 @@
# Contributor: Nick B <Shirakawasuna at gmail _dot_com>
_pkgname=annotate
-_pkgver=1.80.0
+_pkgver=1.82.0
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
-pkgrel=2
+pkgrel=1
pkgdesc="Annotation for microarrays"
arch=(any)
url="https://bioconductor.org/packages/$_pkgname"
@@ -25,12 +25,14 @@ checkdepends=(
r-runit
)
optdepends=(
+ r-biocstyle
r-biostrings
r-genefilter
r-go.db
r-hgu95av2.db
r-humanchrloc
r-iranges
+ r-knitr
r-org.hs.eg.db
r-org.mm.eg.db
r-rae230a.db
@@ -40,8 +42,8 @@ optdepends=(
r-tkwidgets
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
-md5sums=('04d25cadc03401556364f8ca9c3b2a61')
-b2sums=('9d827fd87c50bbd3812c8d370d77e0db7214a3b7c370adaab8dc7f87d1b8bfba9fe784986cb7788bfaf4815a2e1cea441e5c257f2028f0eb06cedecbffe84072')
+md5sums=('3360e99f514042ac90eae8ff68e77e47')
+b2sums=('34dfc32b111da2f801f2e1867d9c62488be3fa6da7e0c2e1a7df05e617b9f113ee333061f291cb601906e1a75b6d3b5a8cc947fc9d43d4423a751e813f38a1a7')
build() {
mkdir build