diff options
| -rw-r--r-- | .SRCINFO | 11 | ||||
| -rw-r--r-- | PKGBUILD | 25 |
2 files changed, 19 insertions, 17 deletions
@@ -1,11 +1,10 @@ pkgbase = r-aspli pkgdesc = Analysis of Alternative Splicing Using RNA-Seq - pkgver = 2.10.0 + pkgver = 2.14.0 pkgrel = 1 url = https://bioconductor.org/packages/ASpli arch = any - license = GPL - depends = r + license = GPL-2.0-or-later depends = r-annotationdbi depends = r-biocgenerics depends = r-biocstyle @@ -24,8 +23,10 @@ pkgbase = r-aspli depends = r-rsamtools depends = r-s4vectors depends = r-tidyr + depends = r-txdbmaker depends = r-upsetr - source = https://bioconductor.org/packages/release/bioc/src/contrib/ASpli_2.10.0.tar.gz - sha256sums = ea85bc3baac381d711ee4b468a464e42e0c0699475165408c6b55eab8e83c210 + source = https://bioconductor.org/packages/release/bioc/src/contrib/ASpli_2.14.0.tar.gz + md5sums = 0c318ecaa7d695b92852277fb46a2c05 + b2sums = fba656c6321a757e9575e53aa57b499f0b40e60ade6e9014b27cd12bb02e9b9260eff3f74395a0b1d56babf37d3a98277f5b2ca0cafc468fa394fefd222cbb50 pkgname = r-aspli @@ -1,16 +1,15 @@ # Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> _pkgname=ASpli -_pkgver=2.10.0 +_pkgver=2.14.0 pkgname=r-${_pkgname,,} -pkgver=2.10.0 +pkgver=${_pkgver//-/.} pkgrel=1 -pkgdesc='Analysis of Alternative Splicing Using RNA-Seq' -arch=('any') -url="https://bioconductor.org/packages/${_pkgname}" -license=('GPL') +pkgdesc="Analysis of Alternative Splicing Using RNA-Seq" +arch=(any) +url="https://bioconductor.org/packages/$_pkgname" +license=('GPL-2.0-or-later') depends=( - r r-annotationdbi r-biocgenerics r-biocstyle @@ -29,17 +28,19 @@ depends=( r-rsamtools r-s4vectors r-tidyr + r-txdbmaker r-upsetr ) source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") -sha256sums=('ea85bc3baac381d711ee4b468a464e42e0c0699475165408c6b55eab8e83c210') +md5sums=('0c318ecaa7d695b92852277fb46a2c05') +b2sums=('fba656c6321a757e9575e53aa57b499f0b40e60ade6e9014b27cd12bb02e9b9260eff3f74395a0b1d56babf37d3a98277f5b2ca0cafc468fa394fefd222cbb50') build() { - R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" + mkdir build + R CMD INSTALL -l build "$_pkgname" } package() { - install -dm0755 "${pkgdir}/usr/lib/R/library" - cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" + install -d "$pkgdir/usr/lib/R/library" + cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library" } -# vim:set ts=2 sw=2 et: |