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-rw-r--r--.SRCINFO11
-rw-r--r--PKGBUILD6
2 files changed, 9 insertions, 8 deletions
diff --git a/.SRCINFO b/.SRCINFO
index 761010c6a4a2..e96efaaaaccf 100644
--- a/.SRCINFO
+++ b/.SRCINFO
@@ -1,16 +1,17 @@
pkgbase = r-biostrings
pkgdesc = Efficient manipulation of biological strings
- pkgver = 2.58.0
+ pkgver = 2.60.0
pkgrel = 1
url = https://bioconductor.org/packages/release/bioc/html/Biostrings.html
arch = i686
arch = x86_64
license = Artistic-2.0
- depends = r>=3.5.0
- depends = r-biocgenerics>=0.31.5
+ depends = r>=4.0.0
+ depends = r-biocgenerics>=0.37.0
depends = r-s4vectors>=0.27.12
depends = r-iranges>=2.23.9
depends = r-xvector>=0.29.2
+ depends = r-genomeinfodb
depends = r-crayon
optdepends = r-bsgenome
optdepends = r-bsgenome.celegans.ucsc.ce2
@@ -24,8 +25,8 @@ pkgbase = r-biostrings
optdepends = r-affy
optdepends = r-affydata
optdepends = r-runit
- source = https://bioconductor.org/packages/release/bioc/src/contrib/Biostrings_2.58.0.tar.gz
- sha256sums = 0577271fccd6996202bd724455c882231eab7c9448f40ce20bd9c13a8e8678e5
+ source = https://bioconductor.org/packages/release/bioc/src/contrib/Biostrings_2.60.0.tar.gz
+ sha256sums = fe0b28157ea2e11700f2b920f76d89d7f8199276a4a19e6478875070b9812d76
pkgname = r-biostrings
diff --git a/PKGBUILD b/PKGBUILD
index 2c57563b7100..c360a1f2c6c2 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -2,7 +2,7 @@
# Contributor: Grey Christoforo <first name at last name dot net>
_bcname=Biostrings
-_bcver=2.58.0
+_bcver=2.60.0
pkgname=r-${_bcname,,}
pkgver=${_bcver//[:-]/.}
pkgrel=1
@@ -10,10 +10,10 @@ pkgdesc="Efficient manipulation of biological strings"
arch=(i686 x86_64)
url="https://bioconductor.org/packages/release/bioc/html/${_bcname}.html"
license=(Artistic-2.0)
-depends=('r>=3.5.0' 'r-biocgenerics>=0.31.5' 'r-s4vectors>=0.27.12' 'r-iranges>=2.23.9' 'r-xvector>=0.29.2' r-crayon)
+depends=('r>=4.0.0' 'r-biocgenerics>=0.37.0' 'r-s4vectors>=0.27.12' 'r-iranges>=2.23.9' 'r-xvector>=0.29.2' r-genomeinfodb r-crayon)
optdepends=(r-bsgenome r-bsgenome.celegans.ucsc.ce2 r-bsgenome.dmelanogaster.ucsc.dm3 r-bsgenome.hsapiens.ucsc.hg18 r-drosophila2probe r-hgu95av2probe r-hgu133aprobe r-genomicfeatures r-hgu95av2cdf r-affy r-affydata r-runit)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_bcname}_${_bcver}.tar.gz")
-sha256sums=('0577271fccd6996202bd724455c882231eab7c9448f40ce20bd9c13a8e8678e5')
+sha256sums=('fe0b28157ea2e11700f2b920f76d89d7f8199276a4a19e6478875070b9812d76')
build() {
cd "${srcdir}"