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| -rw-r--r-- | .SRCINFO | 24 | ||||
| -rw-r--r-- | PKGBUILD | 38 |
2 files changed, 62 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO new file mode 100644 index 000000000000..b0b760e42527 --- /dev/null +++ b/.SRCINFO @@ -0,0 +1,24 @@ +pkgbase = r-chic + pkgdesc = Quality Control Pipeline for ChIP-Seq Data + pkgver = 1.16.0 + pkgrel = 1 + url = https://bioconductor.org/packages/ChIC + arch = any + license = GPL + depends = r + depends = r-biocgenerics + depends = r-caret + depends = r-catools + depends = r-chic.data + depends = r-genomeintervals + depends = r-genomicranges + depends = r-iranges + depends = r-progress + depends = r-randomforest + depends = r-rsamtools + depends = r-s4vectors + depends = r-spp + source = https://bioconductor.org/packages/release/bioc/src/contrib/ChIC_1.16.0.tar.gz + sha256sums = 9fe67ddce1c6d6270a8ee051c2602e21638dd66faae44da9c4284ac6a0155f9d + +pkgname = r-chic diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..7bbd1ba2caa8 --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,38 @@ +# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> + +_pkgname=ChIC +_pkgver=1.16.0 +pkgname=r-${_pkgname,,} +pkgver=1.16.0 +pkgrel=1 +pkgdesc='Quality Control Pipeline for ChIP-Seq Data' +arch=('any') +url="https://bioconductor.org/packages/${_pkgname}" +license=('GPL') +depends=( + r + r-biocgenerics + r-caret + r-catools + r-chic.data + r-genomeintervals + r-genomicranges + r-iranges + r-progress + r-randomforest + r-rsamtools + r-s4vectors + r-spp +) +source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +sha256sums=('9fe67ddce1c6d6270a8ee051c2602e21638dd66faae44da9c4284ac6a0155f9d') + +build() { + R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" +} + +package() { + install -dm0755 "${pkgdir}/usr/lib/R/library" + cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" +} +# vim:set ts=2 sw=2 et: |