diff options
| -rw-r--r-- | .SRCINFO | 28 | ||||
| -rw-r--r-- | PKGBUILD | 45 |
2 files changed, 73 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO new file mode 100644 index 000000000000..a2fb9e589c8c --- /dev/null +++ b/.SRCINFO @@ -0,0 +1,28 @@ +pkgbase = r-fedup + pkgdesc = Fisher's Test for Enrichment and Depletion of User-Defined Pathways + pkgver = 1.4.0 + pkgrel = 1 + url = https://bioconductor.org/packages/fedup + arch = any + license = MIT + depends = r + depends = r-data.table + depends = r-dplyr + depends = r-forcats + depends = r-ggplot2 + depends = r-ggthemes + depends = r-openxlsx + depends = r-rcolorbrewer + depends = r-rcy3 + depends = r-tibble + optdepends = r-biomart + optdepends = r-covr + optdepends = r-devtools + optdepends = r-knitr + optdepends = r-rmarkdown + optdepends = r-testthat + optdepends = r-tidyr + source = https://bioconductor.org/packages/release/bioc/src/contrib/fedup_1.4.0.tar.gz + sha256sums = 383a9105aac3175e97027c3f0967b1fc1569d6ed9fea432aa221d2ff93abc9e1 + +pkgname = r-fedup diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..5694ea1c2d96 --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,45 @@ +# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> + +_pkgname=fedup +_pkgver=1.4.0 +pkgname=r-${_pkgname,,} +pkgver=1.4.0 +pkgrel=1 +pkgdesc="Fisher's Test for Enrichment and Depletion of User-Defined Pathways" +arch=('any') +url="https://bioconductor.org/packages/${_pkgname}" +license=('MIT') +depends=( + r + r-data.table + r-dplyr + r-forcats + r-ggplot2 + r-ggthemes + r-openxlsx + r-rcolorbrewer + r-rcy3 + r-tibble +) +optdepends=( + r-biomart + r-covr + r-devtools + r-knitr + r-rmarkdown + r-testthat + r-tidyr +) +source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +sha256sums=('383a9105aac3175e97027c3f0967b1fc1569d6ed9fea432aa221d2ff93abc9e1') + +build() { + R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" +} + +package() { + install -dm0755 "${pkgdir}/usr/lib/R/library" + cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" + install -Dm644 "${_pkgname}/LICENSE" -t "${pkgdir}/usr/share/licenses/${pkgname}" +} +# vim:set ts=2 sw=2 et: |