diff options
-rw-r--r-- | .SRCINFO | 22 | ||||
-rw-r--r-- | PKGBUILD | 38 |
2 files changed, 60 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO new file mode 100644 index 000000000000..e50786396cf3 --- /dev/null +++ b/.SRCINFO @@ -0,0 +1,22 @@ +pkgbase = r-gispa + pkgdesc = GISPA: Method for Gene Integrated Set Profile Analysis + pkgver = 1.20.0 + pkgrel = 1 + url = https://bioconductor.org/packages/GISPA + arch = any + license = GPL + depends = r + depends = r-biobase + depends = r-changepoint + depends = r-data.table + depends = r-genefilter + depends = r-gseabase + depends = r-hh + depends = r-latticeextra + depends = r-plyr + depends = r-scatterplot3d + optdepends = r-knitr + source = https://bioconductor.org/packages/release/bioc/src/contrib/GISPA_1.20.0.tar.gz + sha256sums = 30e5bf2e785f35c8ddc03cfa70b9571cf8eb25771292453d63e696a0b833fce2 + +pkgname = r-gispa diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..d18b58b12d64 --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,38 @@ +# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> + +_pkgname=GISPA +_pkgver=1.20.0 +pkgname=r-${_pkgname,,} +pkgver=1.20.0 +pkgrel=1 +pkgdesc='GISPA: Method for Gene Integrated Set Profile Analysis' +arch=('any') +url="https://bioconductor.org/packages/${_pkgname}" +license=('GPL') +depends=( + r + r-biobase + r-changepoint + r-data.table + r-genefilter + r-gseabase + r-hh + r-latticeextra + r-plyr + r-scatterplot3d +) +optdepends=( + r-knitr +) +source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +sha256sums=('30e5bf2e785f35c8ddc03cfa70b9571cf8eb25771292453d63e696a0b833fce2') + +build() { + R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" +} + +package() { + install -dm0755 "${pkgdir}/usr/lib/R/library" + cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" +} +# vim:set ts=2 sw=2 et: |