diff options
| -rw-r--r-- | .SRCINFO | 19 | ||||
| -rw-r--r-- | PKGBUILD | 35 |
2 files changed, 54 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO new file mode 100644 index 000000000000..ea97cccd89c4 --- /dev/null +++ b/.SRCINFO @@ -0,0 +1,19 @@ +pkgbase = r-mafdb.exac.r1.0.hs37d5 + pkgdesc = Minor allele frequency data from ExAC release 1.0 for hs37d5 + pkgver = 3.10.0 + pkgrel = 4 + url = https://bioconductor.org/packages/MafDb.ExAC.r1.0.hs37d5 + arch = any + license = Artistic2.0 + depends = r + depends = r-bsgenome + depends = r-genomeinfodb + depends = r-genomicranges + depends = r-genomicscores + depends = r-iranges + depends = r-s4vectors + optdepends = r-snplocs.hsapiens.dbsnp144.grch37 + source = https://bioconductor.org/packages/release/data/annotation/src/contrib/MafDb.ExAC.r1.0.hs37d5_3.10.0.tar.gz + sha256sums = 9f81bc0836d5eff33b81fc3311fad69dfa13ca97e609a0a1588c6978295d9fa1 + +pkgname = r-mafdb.exac.r1.0.hs37d5 diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..9f4de3f2dab2 --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,35 @@ +# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> + +_pkgname=MafDb.ExAC.r1.0.hs37d5 +_pkgver=3.10.0 +pkgname=r-${_pkgname,,} +pkgver=3.10.0 +pkgrel=4 +pkgdesc='Minor allele frequency data from ExAC release 1.0 for hs37d5' +arch=('any') +url="https://bioconductor.org/packages/${_pkgname}" +license=('Artistic2.0') +depends=( + r + r-bsgenome + r-genomeinfodb + r-genomicranges + r-genomicscores + r-iranges + r-s4vectors +) +optdepends=( + r-snplocs.hsapiens.dbsnp144.grch37 +) +source=("https://bioconductor.org/packages/release/data/annotation/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +sha256sums=('9f81bc0836d5eff33b81fc3311fad69dfa13ca97e609a0a1588c6978295d9fa1') + +build() { + R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" +} + +package() { + install -dm0755 "${pkgdir}/usr/lib/R/library" + cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" +} +# vim:set ts=2 sw=2 et: |