diff options
| -rw-r--r-- | .SRCINFO | 11 | ||||
| -rw-r--r-- | PKGBUILD | 9 |
2 files changed, 11 insertions, 9 deletions
@@ -1,7 +1,7 @@ pkgbase = r-msa2dist pkgdesc = MSA2dist calculates pairwise distances between all sequences of a DNAStringSet or a AAStringSet using a custom score matrix and conducts codon based analysis - pkgver = 1.6.0 - pkgrel = 3 + pkgver = 1.8.0 + pkgrel = 1 url = https://bioconductor.org/packages/MSA2dist arch = x86_64 license = GPL-3.0-only @@ -14,6 +14,7 @@ pkgbase = r-msa2dist depends = r-foreach depends = r-genomicranges depends = r-iranges + depends = r-pwalign depends = r-rcpp depends = r-rlang depends = r-seqinr @@ -27,8 +28,8 @@ pkgbase = r-msa2dist optdepends = r-knitr optdepends = r-rmarkdown optdepends = r-testthat - source = https://bioconductor.org/packages/release/bioc/src/contrib/MSA2dist_1.6.0.tar.gz - md5sums = 8a0d1c303af72c93a1810488010c2e6f - b2sums = 158153791f951596afa798d2892d6c0f14c15e1afd230129cd4593f6a6ba17ba492ec06e84fe12fec56f3d85c649bad3b0a7cd45d4f37d5853420e37fbced8ac + source = https://bioconductor.org/packages/release/bioc/src/contrib/MSA2dist_1.8.0.tar.gz + md5sums = f2246da253b2a0d5b3464c228774ad38 + b2sums = 20df7449d220733b87dbe20c42984398fadda3a04b06fd5443aaaf3a1687383609ac03584195af8884070498560412470a1c8f667eeae2e866f20e80246526af pkgname = r-msa2dist @@ -1,10 +1,10 @@ # Maintainer: Pekka Ristola <pekkarr [at] protonmail [dot] com> _pkgname=MSA2dist -_pkgver=1.6.0 +_pkgver=1.8.0 pkgname=r-${_pkgname,,} pkgver=${_pkgver//-/.} -pkgrel=3 +pkgrel=1 pkgdesc="MSA2dist calculates pairwise distances between all sequences of a DNAStringSet or a AAStringSet using a custom score matrix and conducts codon based analysis" arch=(x86_64) url="https://bioconductor.org/packages/$_pkgname" @@ -17,6 +17,7 @@ depends=( r-foreach r-genomicranges r-iranges + r-pwalign r-rcpp r-rlang r-seqinr @@ -40,8 +41,8 @@ optdepends=( r-testthat ) source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") -md5sums=('8a0d1c303af72c93a1810488010c2e6f') -b2sums=('158153791f951596afa798d2892d6c0f14c15e1afd230129cd4593f6a6ba17ba492ec06e84fe12fec56f3d85c649bad3b0a7cd45d4f37d5853420e37fbced8ac') +md5sums=('f2246da253b2a0d5b3464c228774ad38') +b2sums=('20df7449d220733b87dbe20c42984398fadda3a04b06fd5443aaaf3a1687383609ac03584195af8884070498560412470a1c8f667eeae2e866f20e80246526af') build() { mkdir build |