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| -rw-r--r-- | .SRCINFO | 32 | ||||
| -rw-r--r-- | PKGBUILD | 48 |
2 files changed, 80 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO new file mode 100644 index 000000000000..ed2e048b3f55 --- /dev/null +++ b/.SRCINFO @@ -0,0 +1,32 @@ +pkgbase = r-netomics + pkgdesc = Multi-Omics (time-course) network-based integration and interpretation + pkgver = 1.2.0 + pkgrel = 1 + url = https://bioconductor.org/packages/netOmics + arch = any + license = GPL + depends = r + depends = r-annotationdbi + depends = r-dplyr + depends = r-ggplot2 + depends = r-go.db + depends = r-gprofiler2 + depends = r-igraph + depends = r-magrittr + depends = r-minet + depends = r-purrr + depends = r-randomwalkrestartmh + depends = r-tibble + depends = r-tidyr + optdepends = r-biocstyle + optdepends = r-covr + optdepends = r-knitr + optdepends = r-mixomics + optdepends = r-rmarkdown + optdepends = r-testthat + optdepends = r-tidyverse + optdepends = r-timeomics + source = https://bioconductor.org/packages/release/bioc/src/contrib/netOmics_1.2.0.tar.gz + sha256sums = 6531ee69c3c148542a4f7c65d0ebe6155bcde0e3f372af452200e1a8c3a5d287 + +pkgname = r-netomics diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..2dc34e687cc5 --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,48 @@ +# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> + +_pkgname=netOmics +_pkgver=1.2.0 +pkgname=r-${_pkgname,,} +pkgver=1.2.0 +pkgrel=1 +pkgdesc='Multi-Omics (time-course) network-based integration and interpretation' +arch=('any') +url="https://bioconductor.org/packages/${_pkgname}" +license=('GPL') +depends=( + r + r-annotationdbi + r-dplyr + r-ggplot2 + r-go.db + r-gprofiler2 + r-igraph + r-magrittr + r-minet + r-purrr + r-randomwalkrestartmh + r-tibble + r-tidyr +) +optdepends=( + r-biocstyle + r-covr + r-knitr + r-mixomics + r-rmarkdown + r-testthat + r-tidyverse + r-timeomics +) +source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +sha256sums=('6531ee69c3c148542a4f7c65d0ebe6155bcde0e3f372af452200e1a8c3a5d287') + +build() { + R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" +} + +package() { + install -dm0755 "${pkgdir}/usr/lib/R/library" + cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" +} +# vim:set ts=2 sw=2 et: |