diff options
| -rw-r--r-- | .SRCINFO | 11 | ||||
| -rw-r--r-- | PKGBUILD | 31 |
2 files changed, 19 insertions, 23 deletions
@@ -1,12 +1,10 @@ pkgbase = r-phemd pkgdesc = Phenotypic EMD for comparison of single-cell samples pkgver = 1.16.0 - pkgrel = 1 + pkgrel = 2 url = https://bioconductor.org/packages/phemd arch = any - license = GPL - makedepends = git - depends = r + license = GPL2 depends = r-biobase depends = r-biocgenerics depends = r-cowplot @@ -30,7 +28,8 @@ pkgbase = r-phemd depends = r-transport depends = r-vgam optdepends = r-knitr - source = git+https://git.bioconductor.org/packages/phemd - sha256sums = SKIP + source = https://bioconductor.org/packages/release/bioc/src/contrib/phemd_1.16.0.tar.gz + md5sums = f2f4325b02cd7c6b4c96b69de58ec50a + sha256sums = e280bcc6af6de22930bc8403dc9b9b3fd36af8834ec1dd653bcd07732d04b2bd pkgname = r-phemd @@ -1,16 +1,16 @@ -# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> +# Maintainer: Pekka Ristola <pekkarr [at] protonmail [dot] com> +# Contributor: Guoyi Zhang <guoyizhang at malacology dot net> _pkgname=phemd _pkgver=1.16.0 pkgname=r-${_pkgname,,} -pkgver=1.16.0 -pkgrel=1 -pkgdesc='Phenotypic EMD for comparison of single-cell samples' -arch=('any') +pkgver=${_pkgver//-/.} +pkgrel=2 +pkgdesc="Phenotypic EMD for comparison of single-cell samples" +arch=(any) url="https://bioconductor.org/packages/${_pkgname}" -license=('GPL') +license=(GPL2) depends=( - r r-biobase r-biocgenerics r-cowplot @@ -37,19 +37,16 @@ depends=( optdepends=( r-knitr ) -makedepends=( - git -) -source=("git+https://git.bioconductor.org/packages/${_pkgname}") -sha256sums=('SKIP') +source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +md5sums=('f2f4325b02cd7c6b4c96b69de58ec50a') +sha256sums=('e280bcc6af6de22930bc8403dc9b9b3fd36af8834ec1dd653bcd07732d04b2bd') build() { - tar -zcvf ${_pkgname}_${_pkgver}.tar.gz ${_pkgname} - R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" + mkdir -p build + R CMD INSTALL "$_pkgname" -l build } package() { - install -dm0755 "${pkgdir}/usr/lib/R/library" - cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" + install -d "$pkgdir/usr/lib/R/library" + cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library" } -# vim:set ts=2 sw=2 et: |