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-rw-r--r-- | .SRCINFO | 35 | ||||
-rw-r--r-- | PKGBUILD | 51 |
2 files changed, 86 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO new file mode 100644 index 000000000000..e9e4fe0a6bca --- /dev/null +++ b/.SRCINFO @@ -0,0 +1,35 @@ +pkgbase = r-phemd + pkgdesc = Phenotypic EMD for comparison of single-cell samples + pkgver = 1.10.0 + pkgrel = 2 + url = https://bioconductor.org/packages/phemd + arch = any + license = GPL + depends = r + depends = r-biobase + depends = r-biocgenerics + depends = r-cowplot + depends = r-destiny + depends = r-ggplot2 + depends = r-igraph + depends = r-maptree + depends = r-monocle + depends = r-phater + depends = r-pheatmap + depends = r-pracma + depends = r-rann + depends = r-rcolorbrewer + depends = r-reticulate + depends = r-rtsne + depends = r-s4vectors + depends = r-scatterplot3d + depends = r-seurat + depends = r-singlecellexperiment + depends = r-summarizedexperiment + depends = r-transport + depends = r-vgam + optdepends = r-knitr + source = https://bioconductor.org/packages/release/bioc/src/contrib/phemd_1.10.0.tar.gz + sha256sums = 5cfd9efc5bbfcf3629e4c0c7cfe7fd265340d55bf54c2e36bf0098d113df7dd8 + +pkgname = r-phemd diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..3019013c4ce0 --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,51 @@ +# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> + +_pkgname=phemd +_pkgver=1.10.0 +pkgname=r-${_pkgname,,} +pkgver=1.10.0 +pkgrel=2 +pkgdesc='Phenotypic EMD for comparison of single-cell samples' +arch=('any') +url="https://bioconductor.org/packages/${_pkgname}" +license=('GPL') +depends=( + r + r-biobase + r-biocgenerics + r-cowplot + r-destiny + r-ggplot2 + r-igraph + r-maptree + r-monocle + r-phater + r-pheatmap + r-pracma + r-rann + r-rcolorbrewer + r-reticulate + r-rtsne + r-s4vectors + r-scatterplot3d + r-seurat + r-singlecellexperiment + r-summarizedexperiment + r-transport + r-vgam +) +optdepends=( + r-knitr +) +source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +sha256sums=('5cfd9efc5bbfcf3629e4c0c7cfe7fd265340d55bf54c2e36bf0098d113df7dd8') + +build() { + R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" +} + +package() { + install -dm0755 "${pkgdir}/usr/lib/R/library" + cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" +} +# vim:set ts=2 sw=2 et: |