diff options
| -rw-r--r-- | .SRCINFO | 29 | ||||
| -rw-r--r-- | PKGBUILD | 45 |
2 files changed, 74 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO new file mode 100644 index 000000000000..23396145321c --- /dev/null +++ b/.SRCINFO @@ -0,0 +1,29 @@ +pkgbase = r-schot + pkgdesc = single-cell higher order testing + pkgver = 1.8.0 + pkgrel = 1 + url = https://bioconductor.org/packages/scHOT + arch = any + license = GPL + depends = r + depends = r-biocparallel + depends = r-ggforce + depends = r-ggplot2 + depends = r-igraph + depends = r-iranges + depends = r-reshape + depends = r-s4vectors + depends = r-singlecellexperiment + depends = r-summarizedexperiment + optdepends = r-deldir + optdepends = r-knitr + optdepends = r-markdown + optdepends = r-matrixstats + optdepends = r-rmarkdown + optdepends = r-scales + optdepends = r-scater + optdepends = r-scattermore + source = https://bioconductor.org/packages/release/bioc/src/contrib/scHOT_1.8.0.tar.gz + sha256sums = 77e4180f2f19c96354dc4a9e6caab9cfffe08f8681051c40bf3994f156c11317 + +pkgname = r-schot diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..1c583abd3411 --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,45 @@ +# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> + +_pkgname=scHOT +_pkgver=1.8.0 +pkgname=r-${_pkgname,,} +pkgver=1.8.0 +pkgrel=1 +pkgdesc='single-cell higher order testing' +arch=('any') +url="https://bioconductor.org/packages/${_pkgname}" +license=('GPL') +depends=( + r + r-biocparallel + r-ggforce + r-ggplot2 + r-igraph + r-iranges + r-reshape + r-s4vectors + r-singlecellexperiment + r-summarizedexperiment +) +optdepends=( + r-deldir + r-knitr + r-markdown + r-matrixstats + r-rmarkdown + r-scales + r-scater + r-scattermore +) +source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +sha256sums=('77e4180f2f19c96354dc4a9e6caab9cfffe08f8681051c40bf3994f156c11317') + +build() { + R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" +} + +package() { + install -dm0755 "${pkgdir}/usr/lib/R/library" + cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" +} +# vim:set ts=2 sw=2 et: |