diff options
| -rw-r--r-- | .SRCINFO | 30 | ||||
| -rw-r--r-- | PKGBUILD | 46 |
2 files changed, 76 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO new file mode 100644 index 000000000000..6a8fa1c3568e --- /dev/null +++ b/.SRCINFO @@ -0,0 +1,30 @@ +pkgbase = r-topconfects + pkgdesc = Top Confident Effect Sizes + pkgver = 1.12.0 + pkgrel = 1 + url = https://bioconductor.org/packages/topconfects + arch = any + license = LGPL + depends = r + depends = r-assertthat + depends = r-ggplot2 + optdepends = r-annotationdbi + optdepends = r-ashr + optdepends = r-biocstyle + optdepends = r-deseq2 + optdepends = r-dplyr + optdepends = r-edger + optdepends = r-knitr + optdepends = r-limma + optdepends = r-nbpseq + optdepends = r-org.at.tair.db + optdepends = r-readr + optdepends = r-reshape2 + optdepends = r-rmarkdown + optdepends = r-statmod + optdepends = r-testthat + optdepends = r-tidyr + source = https://bioconductor.org/packages/release/bioc/src/contrib/topconfects_1.12.0.tar.gz + sha256sums = 93bca22f8636f1b3e7259ac63cfa5e019e893de279175f3febb8f1b5dfc12c6c + +pkgname = r-topconfects diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..82cc4569f6db --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,46 @@ +# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> + +_pkgname=topconfects +_pkgver=1.12.0 +pkgname=r-${_pkgname,,} +pkgver=1.12.0 +pkgrel=1 +pkgdesc='Top Confident Effect Sizes' +arch=('any') +url="https://bioconductor.org/packages/${_pkgname}" +license=('LGPL') +depends=( + r + r-assertthat + r-ggplot2 +) +optdepends=( + r-annotationdbi + r-ashr + r-biocstyle + r-deseq2 + r-dplyr + r-edger + r-knitr + r-limma + r-nbpseq + r-org.at.tair.db + r-readr + r-reshape2 + r-rmarkdown + r-statmod + r-testthat + r-tidyr +) +source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +sha256sums=('93bca22f8636f1b3e7259ac63cfa5e019e893de279175f3febb8f1b5dfc12c6c') + +build() { + R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" +} + +package() { + install -dm0755 "${pkgdir}/usr/lib/R/library" + cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" +} +# vim:set ts=2 sw=2 et: |