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-rw-r--r-- | .SRCINFO | 22 | ||||
-rw-r--r-- | PKGBUILD | 38 |
2 files changed, 60 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO new file mode 100644 index 000000000000..38f94254e37a --- /dev/null +++ b/.SRCINFO @@ -0,0 +1,22 @@ +pkgbase = r-transformgampoi + pkgdesc = Variance Stabilizing Transformation for Gamma-Poisson Models + pkgver = 1.2.0 + pkgrel = 1 + url = https://bioconductor.org/packages/transformGamPoi + arch = any + license = GPL + depends = r + depends = r-delayedarray + depends = r-glmgampoi + depends = r-hdf5array + depends = r-matrixgenerics + depends = r-summarizedexperiment + optdepends = r-knitr + optdepends = r-rmarkdown + optdepends = r-scran + optdepends = r-tenxpbmcdata + optdepends = r-testthat + source = https://bioconductor.org/packages/release/bioc/src/contrib/transformGamPoi_1.2.0.tar.gz + sha256sums = d8ab0eac519ec917d09328e49aeb9d04c481a4e2caa21d1dfd8460e789288259 + +pkgname = r-transformgampoi diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..1b111c690b77 --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,38 @@ +# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> + +_pkgname=transformGamPoi +_pkgver=1.2.0 +pkgname=r-${_pkgname,,} +pkgver=1.2.0 +pkgrel=1 +pkgdesc='Variance Stabilizing Transformation for Gamma-Poisson Models' +arch=('any') +url="https://bioconductor.org/packages/${_pkgname}" +license=('GPL') +depends=( + r + r-delayedarray + r-glmgampoi + r-hdf5array + r-matrixgenerics + r-summarizedexperiment +) +optdepends=( + r-knitr + r-rmarkdown + r-scran + r-tenxpbmcdata + r-testthat +) +source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +sha256sums=('d8ab0eac519ec917d09328e49aeb9d04c481a4e2caa21d1dfd8460e789288259') + +build() { + R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" +} + +package() { + install -dm0755 "${pkgdir}/usr/lib/R/library" + cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" +} +# vim:set ts=2 sw=2 et: |