diff options
| -rw-r--r-- | .SRCINFO | 20 | ||||
| -rw-r--r-- | PKGBUILD | 37 |
2 files changed, 57 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO new file mode 100644 index 000000000000..c29a795d60bd --- /dev/null +++ b/.SRCINFO @@ -0,0 +1,20 @@ +pkgbase = r-triplex + pkgdesc = Search and visualize intramolecular triplex-forming sequences in DNA + pkgver = 1.36.0 + pkgrel = 1 + url = https://bioconductor.org/packages/triplex + arch = x86_64 + license = BSD + depends = r + depends = r-biostrings + depends = r-genomicranges + depends = r-iranges + depends = r-s4vectors + depends = r-xvector + optdepends = r-bsgenome.celegans.ucsc.ce10 + optdepends = r-rgl + optdepends = r-rtracklayer + source = https://bioconductor.org/packages/release/bioc/src/contrib/triplex_1.36.0.tar.gz + sha256sums = 08bf4e0c1ddb048cf356037133fe86072c9919e23adfdc360c82efbc37a8ce1f + +pkgname = r-triplex diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..c685a23a05f1 --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,37 @@ +# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> + +_pkgname=triplex +_pkgver=1.36.0 +pkgname=r-${_pkgname,,} +pkgver=1.36.0 +pkgrel=1 +pkgdesc='Search and visualize intramolecular triplex-forming sequences in DNA' +arch=('x86_64') +url="https://bioconductor.org/packages/${_pkgname}" +license=('BSD') +depends=( + r + r-biostrings + r-genomicranges + r-iranges + r-s4vectors + r-xvector +) +optdepends=( + r-bsgenome.celegans.ucsc.ce10 + r-rgl + r-rtracklayer +) +source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +sha256sums=('08bf4e0c1ddb048cf356037133fe86072c9919e23adfdc360c82efbc37a8ce1f') + +build() { + R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" +} + +package() { + install -dm0755 "${pkgdir}/usr/lib/R/library" + cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" + install -Dm644 "${_pkgname}/LICENSE" -t "${pkgdir}/usr/share/licenses/${pkgname}" +} +# vim:set ts=2 sw=2 et: |